primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score ycf1_p1 ycf1 1 ATGGTCTCCTGGTTAGCCTC AACATACTAAAGCGGCTCCC 20 20 55.0 50.0 58.5 57.7 0.0 1.4 0.825618 110948 111067 607-607 0.500000 53.4 ycf1_p2 ycf1 2 GGTCTCCTGGTTAGCCTCAT AACATACTAAAGCGGCTCCC 20 20 55.0 50.0 58.5 57.7 0.0 1.4 0.825618 110948 111067 605-605 0.500000 53.4 ycf1_p3 ycf1 3 ATGGTCTCCTGGTTAGCCTC GGCTCCCATTATTGGTGTCA 20 20 55.0 50.0 58.5 57.6 0.0 3.1 0.933791 110948 111067 594-594 0.500000 52.5 ycf1_p4 ycf1 4 GGTCTCCTGGTTAGCCTCAT GGCTCCCATTATTGGTGTCA 20 20 55.0 50.0 58.5 57.6 0.0 3.1 0.933791 110948 111067 592-592 0.500000 52.5 ycf1_p5 ycf1 5 GGTCTCCTGGTTAGCCTCAT CATACTAAAGCGGCTCCCAT 20 20 55.0 50.0 58.5 57.4 0.0 1.4 1.049249 110948 111067 603-603 0.500000 51.6 ycf1-rps15_p1 ycf1-rps15 1 AATTATGGAACCTGCCCGTC CCGCAGACCTCTCTGAGATA 20 20 50.0 55.0 57.9 58.0 0.0 8.0 0.078517 111448 111841 1064-1064 0.500000 59.4 ycf1-rps15_p2 ycf1-rps15 2 AATTATGGAACCTGCCCGTC AACACCATGCATTGATGGGT 20 20 50.0 45.0 57.9 58.1 0.0 8.9 0.111405 111448 111841 1338-1338 0.500000 59.1 ycf1-rps15_p3 ycf1-rps15 3 AATTATGGAACCTGCCCGTC TAAGCCAGTAACCGTTGACG 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.121619 111448 111841 1099-1099 0.500000 59.0 ycf1-rps15_p4 ycf1-rps15 4 TATGGAACCTGCCCGTCTAT CCGCAGACCTCTCTGAGATA 20 20 50.0 55.0 57.9 58.0 0.0 8.0 0.122845 111448 111841 1061-1061 0.500000 59.0 ycf1-rps15_p5 ycf1-rps15 5 TATGGAACCTGCCCGTCTAT AACACCATGCATTGATGGGT 20 20 50.0 45.0 57.9 58.1 0.0 8.9 0.155733 111448 111841 1335-1335 0.500000 58.8 rps15-ndhH_p1 rps15-ndhH 1 CGTCAACGGTTACTGGCTTA GTAAATCAGCAGCGACTCCA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.078982 112121 112208 686-686 0.500000 59.4 rps15-ndhH_p2 rps15-ndhH 2 CGTCAACGGTTACTGGCTTA TAAATCAGCAGCGACTCCAC 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.078982 112121 112208 685-685 0.500000 59.4 rps15-ndhH_p3 rps15-ndhH 3 CGTCAACGGTTACTGGCTTA AACACCATGCATTGATGGGT 20 20 50.0 45.0 57.9 58.1 0.0 8.9 0.127460 112121 112208 259-259 0.500000 59.0 rps15-ndhH_p4 rps15-ndhH 4 CGTCAACGGTTACTGGCTTA AGGAGTCTGTGCCCCAATAT 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.169974 112121 112208 574-574 0.500000 58.6 rps15-ndhH_p5 rps15-ndhH 5 AGGTCTGCGGAAAATTCTGG TAAATCAGCAGCGACTCCAC 20 20 50.0 50.0 58.2 58.0 0.0 0.0 0.183760 112121 112208 710-710 0.500000 58.5 ndhH_p1 ndhH 1 CGTCAACGGTTACTGGCTTA CGTTGTTGTATACCCGCAGA 20 20 50.0 50.0 57.9 58.0 0.0 0.0 0.069789 112209 113390 1549-1549 0.500000 59.4 ndhH_p2 ndhH 2 CGTCAACGGTTACTGGCTTA AAGAATTCCCAAAGGCCCTG 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.126061 112209 113390 1586-1586 0.500000 59.0 ndhH_p3 ndhH 3 CGTCAACGGTTACTGGCTTA CCTGACATAAGAAGGCCGAC 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.127512 112209 113390 1813-1813 0.500000 59.0 ndhH_p4 ndhH 4 CGTCAACGGTTACTGGCTTA GACATAAGAAGGCCGACAGG 20 20 50.0 55.0 57.9 58.1 0.0 0.0 0.127512 112209 113390 1810-1810 0.500000 59.0 ndhH_p5 ndhH 5 CGTCAACGGTTACTGGCTTA TGAAGAATTCCCAAAGGCCC 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.131646 112209 113390 1588-1588 0.500000 58.9 ndhA_p1 ndhA 1 GTGGAGTCGCTGCTGATTTA TGCAGCTCGTACTGTTTGTT 20 20 50.0 45.0 58.0 58.1 0.0 8.8 0.062041 113392 115537 2983-2983 0.500000 59.5 ndhA_p2 ndhA 2 GTGGAGTCGCTGCTGATTTA TTGCAGCTCGTACTGTTTGT 20 20 50.0 45.0 58.0 58.1 0.0 8.8 0.062041 113392 115537 2984-2984 0.500000 59.5 ndhA_p3 ndhA 3 TGGAGTCGCTGCTGATTTAC TGCAGCTCGTACTGTTTGTT 20 20 50.0 45.0 58.0 58.1 0.0 8.8 0.062041 113392 115537 2982-2982 0.500000 59.5 ndhA_p4 ndhA 4 TGGAGTCGCTGCTGATTTAC TTGCAGCTCGTACTGTTTGT 20 20 50.0 45.0 58.0 58.1 0.0 8.8 0.062041 113392 115537 2983-2983 0.500000 59.5 ndhA_p5 ndhA 5 TCAACAGGCCCTAGAAGGAA TGCAGCTCGTACTGTTTGTT 20 20 50.0 45.0 58.0 58.1 0.0 8.8 0.090759 113392 115537 2640-2640 0.500000 59.3 ndhI_p1 ndhI 1 AGCCGAGTGTGAACGATTAC AAAAACAATTCTCGCCCCCT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.017512 115616 116116 1105-1105 0.500000 59.9 ndhI_p2 ndhI 2 TACATATCCGTTCCCGAGCT AAAAACAATTCTCGCCCCCT 20 20 50.0 45.0 58.0 58.0 0.0 0.0 0.018560 115616 116116 921-921 0.500000 59.9 ndhI_p3 ndhI 3 TTTGTGACCTTTGAGGAGCC AAAAACAATTCTCGCCCCCT 20 20 50.0 45.0 58.0 58.0 0.1 0.0 0.028425 115616 116116 1311-1311 0.500000 59.8 ndhI_p4 ndhI 4 GACCTTTGAGGAGCCGTATG AAAAACAATTCTCGCCCCCT 20 20 55.0 45.0 58.1 58.0 0.1 0.0 0.068356 115616 116116 1306-1306 0.500000 59.5 ndhI_p5 ndhI 5 GTACATATCCGTTCCCGAGC AAAAACAATTCTCGCCCCCT 20 20 55.0 45.0 57.9 58.0 0.0 0.0 0.071421 115616 116116 922-922 0.500000 59.4 ndhI-ndhG_p1 ndhI-ndhG 1 AACAAACAGTACGAGCTGCA GCAGCTACAAAAGGGGAGTT 20 20 45.0 50.0 58.1 58.1 1.0 0.0 0.140838 116117 116476 1003-1003 0.500000 58.9 ndhI-ndhG_p2 ndhI-ndhG 2 ACAAACAGTACGAGCTGCAA GCAGCTACAAAAGGGGAGTT 20 20 45.0 50.0 58.1 58.1 1.0 0.0 0.140838 116117 116476 1002-1002 0.500000 58.9 ndhI-ndhG_p3 ndhI-ndhG 3 AACAAACAGTACGAGCTGCA TTTCCCACGGTCCAAAGATG 20 20 45.0 50.0 58.1 58.1 1.0 0.0 0.147609 116117 116476 1114-1114 0.500000 58.8 ndhI-ndhG_p4 ndhI-ndhG 4 ACAAACAGTACGAGCTGCAA CATTTCCCACGGTCCAAAGA 20 20 45.0 50.0 58.1 58.1 1.0 0.0 0.147609 116117 116476 1115-1115 0.500000 58.8 ndhI-ndhG_p5 ndhI-ndhG 5 ACAAACAGTACGAGCTGCAA TTTCCCACGGTCCAAAGATG 20 20 45.0 50.0 58.1 58.1 1.0 0.0 0.147609 116117 116476 1113-1113 0.500000 58.8 ndhG_p1 ndhG 1 AGGGGGCGAGAATTGTTTTT TGAATCGATGAGTTCCCCCA 20 20 45.0 50.0 58.0 58.4 0.0 0.0 0.430784 116477 117007 1488-1488 0.500000 56.6 ndhG_p2 ndhG 2 AGGGGGCGAGAATTGTTTTT GAGTCCAATAGCGGCTTCAG 20 20 45.0 55.0 58.0 58.4 0.0 8.3 0.433326 116477 117007 1259-1259 0.500000 56.5 ndhG_p3 ndhG 3 AGGGGGCGAGAATTGTTTTT AATAGCGAGTCCAATAGCGG 20 20 45.0 50.0 58.0 57.6 0.0 0.0 0.450221 116477 117007 1265-1265 0.500000 56.4 ndhG_p4 ndhG 4 TTGATCACATCCGAGCGTTT TGAATCGATGAGTTCCCCCA 20 20 45.0 50.0 57.9 58.4 0.0 0.0 0.514409 116477 117007 1933-1933 0.500000 55.9 ndhG_p5 ndhG 5 TTGATCACATCCGAGCGTTT GAGTCCAATAGCGGCTTCAG 20 20 45.0 55.0 57.9 58.4 0.0 8.3 0.516951 116477 117007 1704-1704 0.500000 55.9 ndhG-ndhE_p1 ndhG-ndhE 1 AGTCACTTCCGTGGTCTGTA TCCTCTGTTCTTGGAGCAGA 20 20 50.0 50.0 58.0 58.0 0.0 12.1 0.024335 117008 117223 1140-1140 0.500000 59.8 ndhG-ndhE_p2 ndhG-ndhE 2 GTCACTTCCGTGGTCTGTAC TCCTCTGTTCTTGGAGCAGA 20 20 55.0 50.0 57.9 58.0 0.0 12.1 0.077196 117008 117223 1139-1139 0.500000 59.4 ndhG-ndhE_p3 ndhG-ndhE 3 AACTCCCCTTTTGTAGCTGC TCCTCTGTTCTTGGAGCAGA 20 20 50.0 50.0 58.1 58.0 0.0 12.1 0.104399 117008 117223 1274-1274 0.500000 59.2 ndhG-ndhE_p4 ndhG-ndhE 4 CATCTTTGGACCGTGGGAAA TCCTCTGTTCTTGGAGCAGA 20 20 50.0 50.0 58.1 58.0 0.0 12.1 0.111169 117008 117223 1163-1163 0.500000 59.1 ndhG-ndhE_p5 ndhG-ndhE 5 TCTTTGGACCGTGGGAAATG TCCTCTGTTCTTGGAGCAGA 20 20 50.0 50.0 58.1 58.0 0.0 12.1 0.111169 117008 117223 1161-1161 0.500000 59.1 ndhE-psaC_p1 ndhE-psaC 1 TAATCGGCGCAATTGCTGTA TCCTCTGTTCTTGGAGCAGA 20 20 45.0 50.0 58.3 58.0 26.9 12.1 0.357634 117530 117769 934-934 0.500000 57.1 ndhE-psaC_p2 ndhE-psaC 2 CTGAAGCCGCTATTGGACTC TCCTCTGTTCTTGGAGCAGA 20 20 55.0 50.0 58.4 58.0 0.0 12.1 0.439101 117530 117769 472-472 0.500000 56.5 ndhE-psaC_p3 ndhE-psaC 3 CCGCTATTGGACTCGCTATT TCCTCTGTTCTTGGAGCAGA 20 20 50.0 50.0 57.6 58.0 0.0 12.1 0.455995 117530 117769 466-466 0.500000 56.4 ndhE-psaC_p4 ndhE-psaC 4 TAATCGGCGCAATTGCTGTA ACATCCGTCCCAAGGTATCA 20 20 45.0 50.0 58.3 58.1 26.9 0.0 0.468048 117530 117769 896-896 0.500000 56.3 ndhE-psaC_p5 ndhE-psaC 5 TAATCGGCGCAATTGCTGTA CAACCGACACAATCCTCTGT 20 20 45.0 50.0 58.3 57.8 26.9 0.0 0.512010 117530 117769 946-946 0.500000 55.9 ndhD_p1 ndhD 1 TCTGCTCCAAGAACAGAGGA ATTCACGCGGTTCTCGTAAA 20 20 50.0 45.0 58.0 57.9 0.0 12.5 0.084293 118130 119632 1915-1915 0.500000 59.3 ndhD_p2 ndhD 2 TCTGCTCCAAGAACAGAGGA TCAGGAGCAGTATGGGCTAA 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.190142 118130 119632 2268-2268 0.500000 58.5 ndhD_p3 ndhD 3 TCTGCTCCAAGAACAGAGGA TTCAGGAGCAGTATGGGCTA 20 20 50.0 50.0 58.0 57.8 0.0 0.0 0.190142 118130 119632 2269-2269 0.500000 58.5 ndhD_p4 ndhD 4 TGATACCTTGGGACGGATGT ATTCACGCGGTTCTCGTAAA 20 20 50.0 45.0 58.1 57.9 0.0 12.5 0.194707 118130 119632 1953-1953 0.500000 58.4 ndhD_p5 ndhD 5 TCTGCTCCAAGAACAGAGGA GCGGTTCTCGTAAAGACCAA 20 20 50.0 50.0 58.0 58.2 0.0 0.0 0.228444 118130 119632 1909-1909 0.500000 58.2 ccsA_p1 ccsA 1 GTTTTTGATTCTGGACCGCG GTGAAATCGGTAGACACGCT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.044083 119906 120874 1581-1581 0.500000 59.6 ccsA_p2 ccsA 2 GTTTTTGATTCTGGACCGCG TGAAATCGGTAGACACGCTG 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.045454 119906 120874 1580-1580 0.500000 59.6 ccsA_p3 ccsA 3 GTTTTTGATTCTGGACCGCG AATTTTGGTGGTGGGGAGTC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.045935 119906 120874 2104-2104 0.500000 59.6 ccsA_p4 ccsA 4 TTTACGAGAACCGCGTGAAT GTGAAATCGGTAGACACGCT 20 20 45.0 50.0 57.9 58.0 4.9 0.0 0.076667 119906 120874 1285-1285 0.500000 59.4 ccsA_p5 ccsA 5 TTTACGAGAACCGCGTGAAT TGAAATCGGTAGACACGCTG 20 20 45.0 50.0 57.9 58.0 4.9 0.0 0.078038 119906 120874 1284-1284 0.500000 59.4 ccsA-trnL-UAG_p1 ccsA-trnL-UAG 1 GAAGTAGCAAAGCCTTGGGT GTGAAATCGGTAGACACGCT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.096773 120875 120998 539-539 0.500000 59.2 ccsA-trnL-UAG_p2 ccsA-trnL-UAG 2 GAAGTAGCAAAGCCTTGGGT TGAAATCGGTAGACACGCTG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.098143 120875 120998 538-538 0.500000 59.2 ccsA-trnL-UAG_p3 ccsA-trnL-UAG 3 GAAGTAGCAAAGCCTTGGGT AATTTTGGTGGTGGGGAGTC 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.098624 120875 120998 1062-1062 0.500000 59.2 ccsA-trnL-UAG_p4 ccsA-trnL-UAG 4 GAAGTAGCAAAGCCTTGGGT TGGTGGTGGGGAGTCTTATT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.142689 120875 120998 1057-1057 0.500000 58.9 ccsA-trnL-UAG_p5 ccsA-trnL-UAG 5 GAAGTAGCAAAGCCTTGGGT TTGGTGGTGGGGAGTCTTAT 20 20 50.0 50.0 58.1 57.9 0.0 0.0 0.142689 120875 120998 1058-1058 0.500000 58.9 trnL-UAG-rpl32_p1 trnL-UAG-rpl32 1 AGCGTGTCTACCGATTTCAC AAAGGAAAGGATATGGGGCG 20 20 50.0 50.0 58.0 57.6 0.0 0.0 0.372803 121079 121819 874-874 0.500000 57.0 trnL-UAG-rpl32_p2 trnL-UAG-rpl32 2 CAGCGTGTCTACCGATTTCA AAAGGAAAGGATATGGGGCG 20 20 50.0 50.0 58.0 57.6 0.0 0.0 0.374173 121079 121819 875-875 0.500000 57.0 trnL-UAG-rpl32_p3 trnL-UAG-rpl32 3 AGCGTGTCTACCGATTTCAC CGGCGTTAAAAGCTTTGTCA 20 20 50.0 45.0 58.0 57.6 0.0 13.5 0.400763 121079 121819 856-856 0.500000 56.8 trnL-UAG-rpl32_p4 trnL-UAG-rpl32 4 CAGCGTGTCTACCGATTTCA CGGCGTTAAAAGCTTTGTCA 20 20 50.0 45.0 58.0 57.6 0.0 13.5 0.402133 121079 121819 857-857 0.500000 56.8 trnL-UAG-rpl32_p5 trnL-UAG-rpl32 5 GAAGTAGCAAAGCCTTGGGT AAAGGAAAGGATATGGGGCG 20 20 50.0 50.0 58.1 57.6 0.0 0.0 0.453915 121079 121819 1393-1393 0.500000 56.4 rpl32-ndhF_p1 rpl32-ndhF 1 GACTCCCCACCACCAAAATT GCAGATTTAGCAATCGCACC 20 20 50.0 50.0 58.0 57.9 0.0 8.0 0.120722 121985 122852 2005-2005 0.500000 59.0 rpl32-ndhF_p2 rpl32-ndhF 2 GACTCCCCACCACCAAAATT AACAGGTCGTGTGAACCAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.126508 121985 122852 1790-1790 0.500000 59.0 rpl32-ndhF_p3 rpl32-ndhF 3 GACTCCCCACCACCAAAATT ACAGGTCGTGTGAACCAAAA 20 20 50.0 45.0 58.0 57.9 0.0 0.0 0.126508 121985 122852 1789-1789 0.500000 59.0 rpl32-ndhF_p4 rpl32-ndhF 4 AATAAGACTCCCCACCACCA GCAGATTTAGCAATCGCACC 20 20 50.0 50.0 57.9 57.9 0.0 8.0 0.164787 121985 122852 2010-2010 0.500000 58.7 rpl32-ndhF_p5 rpl32-ndhF 5 ATAAGACTCCCCACCACCAA GCAGATTTAGCAATCGCACC 20 20 50.0 50.0 57.9 57.9 0.0 8.0 0.164787 121985 122852 2009-2009 0.500000 58.7 ndhF_p1 ndhF 1 AGGTAAGATCCGGTGAATCG GCCGAGAAGAAGGTATCAGC 20 20 50.0 55.0 56.8 58.1 0.0 0.0 1.320594 122853 125078 2708-2708 0.500000 49.4 ndhF_p2 ndhF 2 AGGTAAGATCCGGTGAATCG CTAGCACTGGGTAGACCTCA 20 20 50.0 55.0 56.8 57.9 0.0 0.0 1.325374 122853 125078 2624-2624 0.500000 49.4 ndhF_p3 ndhF 3 AGGTAAGATCCGGTGAATCG CGCCTCTTCATCTAGCACTG 20 20 50.0 55.0 56.8 58.1 0.0 0.0 1.329601 122853 125078 2635-2635 0.500000 49.4 ndhF_p4 ndhF 4 AGGTAAGATCCGGTGAATCG TCGTTGTGGTCGGACTCTAT 20 20 50.0 50.0 56.8 58.2 0.0 8.2 1.349698 122853 125078 2812-2812 0.500000 49.2 ndhF_p5 ndhF 5 AGGTAAGATCCGGTGAATCG ATCAATTCGGTCGTTGTGGT 20 20 50.0 45.0 56.8 57.8 0.0 0.0 1.358889 122853 125078 2822-2822 0.500000 49.1