primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CCGACGCTTTAATCCACTCA ACCGAAAGACCCTTTAACTGT 20 21 50.0 42.9 58.0 57.1 0.0 0.0 1.856041 8039 8854 899-917 1.000000 70.9 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 ACGGAAAGAGAGGGATTCGA ACCGAAAGACCCTTTAACTGT 20 21 50.0 42.9 58.2 57.1 0.0 0.0 2.002806 8039 8854 957-975 1.000000 69.4 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 ACGCTTTAATCCACTCAGCC ACCGAAAGACCCTTTAACTGT 20 21 50.0 42.9 58.3 57.1 0.0 0.0 2.112392 8039 8854 896-914 1.000000 68.8 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 CGCTTTAATCCACTCAGCCA ACCGAAAGACCCTTTAACTGT 20 21 50.0 42.9 58.3 57.1 0.0 0.0 2.113620 8039 8854 895-913 1.000000 68.8 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 TGGAAACGGAAAGAGAGGGA ACCGAAAGACCCTTTAACTGT 20 21 50.0 42.9 58.3 57.1 0.0 0.0 2.126914 8039 8854 962-980 1.000000 68.3 ycf1_p1 ycf1 1 CTCGACCAAAATCCCCCAAA ACATACTGAAACGACTGCCA 20 20 50.0 45.0 58.1 57.2 0.0 0.0 0.913813 114314 114433 1110-1110 0.500000 52.7 ycf1_p2 ycf1 2 TCGACCAAAATCCCCCAAAG ACATACTGAAACGACTGCCA 20 20 50.0 45.0 58.1 57.2 0.0 0.0 0.913813 114314 114433 1109-1109 0.500000 52.7 ycf1_p3 ycf1 3 AAAGAACCCACAAGCCAAGT ACATACTGAAACGACTGCCA 20 20 45.0 45.0 57.8 57.2 0.0 0.0 0.990864 114314 114433 841-841 0.500000 52.1 ycf1_p4 ycf1 4 GGGACGAGACTTTGAACCAA ACATACTGAAACGACTGCCA 20 20 50.0 45.0 57.8 57.2 0.0 0.0 1.081529 114314 114433 666-666 0.500000 51.3 ycf1_p5 ycf1 5 GACCAAAATCCCCCAAAGGA ACATACTGAAACGACTGCCA 20 20 50.0 45.0 57.7 57.2 0.0 0.0 1.150710 114314 114433 1107-1107 0.500000 50.8 ycf1-rps15_p1 ycf1-rps15 1 GGGACGAGACTTTGAACCAA TCCCAACGCGTTACATAAGG 20 20 50.0 50.0 57.8 58.0 0.0 26.1 0.262780 114778 115162 1680-1680 0.500000 57.9 ycf1-rps15_p2 ycf1-rps15 2 GGGACGAGACTTTGAACCAA AACACCATGCATTGATGGGT 20 20 50.0 45.0 57.8 58.1 0.0 8.9 0.308466 114778 115162 1543-1543 0.500000 57.5 ycf1-rps15_p3 ycf1-rps15 3 GGGACGAGACTTTGAACCAA TGCATTGATGGGTGATGAGG 20 20 50.0 50.0 57.8 57.9 0.0 0.0 0.311353 114778 115162 1536-1536 0.500000 57.5 ycf1-rps15_p4 ycf1-rps15 4 GGGACGAGACTTTGAACCAA GCATTGATGGGTGATGAGGT 20 20 50.0 50.0 57.8 57.9 0.0 0.0 0.312814 114778 115162 1535-1535 0.500000 57.5 ycf1-rps15_p5 ycf1-rps15 5 GGGACGAGACTTTGAACCAA CCCAGAATTTTCCGCAAACC 20 20 50.0 50.0 57.8 57.9 0.0 0.0 0.328692 114778 115162 1271-1271 0.500000 57.4 ndhH_p1 ndhH 1 GGTTTGCGGAAAATTCTGGG TCACTGCTAAGGATGGACCA 20 20 50.0 50.0 57.9 58.0 2.8 0.0 0.127639 115533 116714 1719-1719 0.500000 59.0 ndhH_p2 ndhH 2 GGTTTGCGGAAAATTCTGGG TGCTAAGGATGGACCAATGC 20 20 50.0 50.0 57.9 57.9 2.8 0.0 0.135986 115533 116714 1715-1715 0.500000 58.9 ndhH_p3 ndhH 3 GGTTTGCGGAAAATTCTGGG AAGAATTCCCAAAGGCCCAG 20 20 50.0 50.0 57.9 58.1 2.8 0.0 0.136072 115533 116714 1619-1619 0.500000 58.9 ndhH_p4 ndhH 4 GGTTTGCGGAAAATTCTGGG GAAGAATTCCCAAAGGCCCA 20 20 50.0 50.0 57.9 58.1 2.8 0.0 0.141657 115533 116714 1620-1620 0.500000 58.9 ndhH_p5 ndhH 5 GGTTTGCGGAAAATTCTGGG TGAAGAATTCCCAAAGGCCC 20 20 50.0 50.0 57.9 58.1 2.8 0.0 0.141657 115533 116714 1621-1621 0.500000 58.9 ndhA_p1 ndhA 1 GGCAAAAAGAGGGGGATTCA TCAAAGTGTATTCGGCCTCG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.067392 116716 118879 2847-2847 0.500000 59.5 ndhA_p2 ndhA 2 TGGCAAAAAGAGGGGGATTC TCAAAGTGTATTCGGCCTCG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.067392 116716 118879 2848-2848 0.500000 59.5 ndhA_p3 ndhA 3 GGCAAAAAGAGGGGGATTCA GCGTGGGACAAGGTTATCAT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.101196 116716 118879 2766-2766 0.500000 59.2 ndhA_p4 ndhA 4 TGGCAAAAAGAGGGGGATTC GCGTGGGACAAGGTTATCAT 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.101196 116716 118879 2767-2767 0.500000 59.2 ndhA_p5 ndhA 5 AGTCGAAGCACCAAAAGGAG TCAAAGTGTATTCGGCCTCG 20 20 50.0 50.0 58.1 58.0 0.0 0.0 0.120347 116716 118879 2612-2612 0.500000 59.0 ndhI_p1 ndhI 1 GGAGCCGTATGAGGTGAAAG AATCATGTATTGGTCCGGGC 20 20 55.0 50.0 58.1 58.0 0.0 0.0 0.077419 118961 119458 1575-1575 0.500000 59.4 ndhI_p2 ndhI 2 GGAGCCGTATGAGGTGAAAG ATAAGACCCGGTCCCAGAAA 20 20 55.0 50.0 58.1 58.0 0.0 14.3 0.097542 118961 119458 1606-1606 0.500000 59.2 ndhI_p3 ndhI 3 GGAGCCGTATGAGGTGAAAG CGCAGCAGCTACAAAATACG 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.135830 118961 119458 1730-1730 0.500000 58.9 ndhI_p4 ndhI 4 GGAGCCGTATGAGGTGAAAG ATGATCCCATACCAGGACGT 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.161828 118961 119458 1918-1918 0.500000 58.7 ndhI_p5 ndhI 5 GGTTCTGTAATAGCGACGGG AATCATGTATTGGTCCGGGC 20 20 55.0 50.0 58.2 58.0 0.0 0.0 0.169647 118961 119458 1545-1545 0.500000 58.6 ndhI-ndhG_p1 ndhI-ndhG 1 CGAGGCCGAATACACTTTGA AATCATGTATTGGTCCGGGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.023326 119459 119810 728-728 0.500000 59.8 ndhI-ndhG_p2 ndhI-ndhG 2 CGAGGCCGAATACACTTTGA ATAAGACCCGGTCCCAGAAA 20 20 50.0 50.0 58.0 58.0 0.0 14.3 0.043450 119459 119810 759-759 0.500000 59.7 ndhI-ndhG_p3 ndhI-ndhG 3 ATGATAACCTTGTCCCACGC AATCATGTATTGGTCCGGGC 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.057130 119459 119810 809-809 0.500000 59.5 ndhI-ndhG_p4 ndhI-ndhG 4 ATGATAACCTTGTCCCACGC ATAAGACCCGGTCCCAGAAA 20 20 50.0 50.0 58.0 58.0 0.0 14.3 0.077254 119459 119810 840-840 0.500000 59.4 ndhI-ndhG_p5 ndhI-ndhG 5 CGAGGCCGAATACACTTTGA CGCAGCAGCTACAAAATACG 20 20 50.0 50.0 58.0 57.9 0.0 0.0 0.081738 119459 119810 883-883 0.500000 59.3 ndhE_p1 ndhE 1 TTTCTGGGACCGGGTCTTAT TACATCCGTCCCAGGGTATC 20 20 50.0 55.0 58.0 58.0 25.4 5.0 0.044237 120578 120883 1393-1393 0.500000 59.6 ndhE_p2 ndhE 2 TTTCTGGGACCGGGTCTTAT CCGAATTGGTTTAGGAGCGA 20 20 50.0 50.0 58.0 58.0 25.4 0.0 0.057409 120578 120883 1177-1177 0.500000 59.5 ndhE_p3 ndhE 3 TTTCTGGGACCGGGTCTTAT TCCGAATTGGTTTAGGAGCG 20 20 50.0 50.0 58.0 58.0 25.4 0.0 0.057409 120578 120883 1178-1178 0.500000 59.5 ndhE_p4 ndhE 4 CGTATTTTGTAGCTGCTGCG TACATCCGTCCCAGGGTATC 20 20 50.0 55.0 57.9 58.0 13.4 5.0 0.082525 120578 120883 1269-1269 0.500000 59.3 ndhE_p5 ndhE 5 CGTATTTTGTAGCTGCTGCG CCGAATTGGTTTAGGAGCGA 20 20 50.0 50.0 57.9 58.0 13.4 0.0 0.095697 120578 120883 1053-1053 0.500000 59.2 psaC-ndhD_p1 psaC-ndhD 1 GATACCCTGGGACGGATGTA CCTATTTGCCCGCTGTACAT 20 20 55.0 50.0 58.0 58.0 22.2 0.0 0.038052 121386 121479 664-664 0.500000 59.7 psaC-ndhD_p2 psaC-ndhD 2 CGCTCCTAAACCAATTCGGA CCTATTTGCCCGCTGTACAT 20 20 50.0 50.0 58.0 58.0 1.5 0.0 0.051223 121386 121479 879-879 0.500000 59.6 psaC-ndhD_p3 psaC-ndhD 3 TCGCTCCTAAACCAATTCGG CCTATTTGCCCGCTGTACAT 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.051223 121386 121479 880-880 0.500000 59.6 psaC-ndhD_p4 psaC-ndhD 4 GATACCCTGGGACGGATGTA ACCAATACCCAGAACTCCCA 20 20 55.0 50.0 58.0 57.9 22.2 0.0 0.059117 121386 121479 842-842 0.500000 59.5 psaC-ndhD_p5 psaC-ndhD 5 CGCTCCTAAACCAATTCGGA ACCAATACCCAGAACTCCCA 20 20 50.0 50.0 58.0 57.9 1.5 0.0 0.072289 121386 121479 1057-1057 0.500000 59.4 ndhD_p1 ndhD 1 GATACCCTGGGACGGATGTA GAGCTGGGACCCAAAAGAAA 20 20 55.0 50.0 58.0 58.0 22.2 15.9 0.009994 121480 123009 2226-2226 0.500000 59.9 ndhD_p2 ndhD 2 GATACCCTGGGACGGATGTA AACTAGTGAGAACCCGGACA 20 20 55.0 50.0 58.0 58.0 22.2 0.7 0.010740 121480 123009 1963-1963 0.500000 59.9 ndhD_p3 ndhD 3 GATACCCTGGGACGGATGTA ACTAGTGAGAACCCGGACAA 20 20 55.0 50.0 58.0 58.0 22.2 0.7 0.010740 121480 123009 1962-1962 0.500000 59.9 ndhD_p4 ndhD 4 CGCTCCTAAACCAATTCGGA GAGCTGGGACCCAAAAGAAA 20 20 50.0 50.0 58.0 58.0 1.5 15.9 0.023166 121480 123009 2441-2441 0.500000 59.8 ndhD_p5 ndhD 5 TCGCTCCTAAACCAATTCGG GAGCTGGGACCCAAAAGAAA 20 20 50.0 50.0 58.0 58.0 0.0 15.9 0.023166 121480 123009 2442-2442 0.500000 59.8 ccsA_p1 ccsA 1 TGTCCGGGTTCTCACTAGTT GCGGCATGTCATCTCCTAAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.051811 123241 124209 1159-1159 0.500000 59.6 ccsA_p2 ccsA 2 TTGTCCGGGTTCTCACTAGT GCGGCATGTCATCTCCTAAA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.051811 123241 124209 1160-1160 0.500000 59.6 ccsA_p3 ccsA 3 GTAGCTTTTCGATGGCCTCA GCGGCATGTCATCTCCTAAA 20 20 50.0 50.0 58.0 58.0 3.3 0.0 0.070617 123241 124209 1683-1683 0.500000 59.4 ccsA_p4 ccsA 4 TAGCTTTTCGATGGCCTCAC GCGGCATGTCATCTCCTAAA 20 20 50.0 50.0 58.0 58.0 3.3 0.0 0.070617 123241 124209 1682-1682 0.500000 59.4 ccsA_p5 ccsA 5 TGTCCGGGTTCTCACTAGTT CTCGCCATCAATCGACTCAA 20 20 50.0 50.0 58.0 58.1 0.0 0.0 0.078809 123241 124209 1696-1696 0.500000 59.4 ccsA-trnL-UAG_p1 ccsA-trnL-UAG 1 TGATCCACATAAAAGGGCCG CTCGCCATCAATCGACTCAA 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.124773 124210 124318 1114-1114 0.500000 59.0 ccsA-trnL-UAG_p2 ccsA-trnL-UAG 2 TGATCCACATAAAAGGGCCG GAGTTCAAGACAAGCCGCTA 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.131620 124210 124318 664-664 0.500000 58.9 ccsA-trnL-UAG_p3 ccsA-trnL-UAG 3 AACCACTCGGATTGAAGAGC CTCGCCATCAATCGACTCAA 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.174043 124210 124318 1059-1059 0.500000 58.6 ccsA-trnL-UAG_p4 ccsA-trnL-UAG 4 TGATCCACATAAAAGGGCCG TAGACACGCTGCTCTTAGGA 20 20 50.0 50.0 57.9 57.9 0.0 0.0 0.175612 124210 124318 632-632 0.500000 58.6 ccsA-trnL-UAG_p5 ccsA-trnL-UAG 5 TGATCCACATAAAAGGGCCG ACAAGCCGCTATGGTGAAAT 20 20 50.0 45.0 57.9 57.9 0.0 0.0 0.180105 124210 124318 655-655 0.500000 58.6 trnL-UAG-rpl32_p1 trnL-UAG-rpl32 1 TTTAGGAGATGACATGCCGC AAAAAGCGCACTTCTGCATC 20 20 50.0 45.0 58.0 57.9 0.0 11.5 0.102535 124399 125197 1073-1073 0.500000 59.2 trnL-UAG-rpl32_p2 trnL-UAG-rpl32 2 TGATCCACATAAAAGGGCCG AAAAAGCGCACTTCTGCATC 20 20 50.0 45.0 57.9 57.9 0.0 11.5 0.107429 124399 125197 1630-1630 0.500000 59.1 trnL-UAG-rpl32_p3 trnL-UAG-rpl32 3 AACCACTCGGATTGAAGAGC AAAAAGCGCACTTCTGCATC 20 20 50.0 45.0 57.9 57.9 0.0 11.5 0.156699 124399 125197 1575-1575 0.500000 58.7 trnL-UAG-rpl32_p4 trnL-UAG-rpl32 4 TCCTAAGAGCAGCGTGTCTA AAAAAGCGCACTTCTGCATC 20 20 50.0 45.0 57.9 57.9 0.0 11.5 0.180371 124399 125197 1018-1018 0.500000 58.6 trnL-UAG-rpl32_p5 trnL-UAG-rpl32 5 AAAAGGGCCGCATAGCTTAA AAAAAGCGCACTTCTGCATC 20 20 45.0 45.0 57.9 57.9 0.0 11.5 0.193904 124399 125197 1620-1620 0.500000 58.4 rpl32-ndhF_p1 rpl32-ndhF 1 TTGAGTCGATTGATGGCGAG CAAGAGGTCGTGTGAACCAA 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.125334 125390 126187 1857-1857 0.500000 59.0 rpl32-ndhF_p2 rpl32-ndhF 2 CCCACCTTGGAACTTGGAAA CAAGAGGTCGTGTGAACCAA 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.132550 125390 126187 1634-1634 0.500000 58.9 rpl32-ndhF_p3 rpl32-ndhF 3 AAAACTCCCCACCTTGGAAC CAAGAGGTCGTGTGAACCAA 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.134036 125390 126187 1641-1641 0.500000 58.9 rpl32-ndhF_p4 rpl32-ndhF 4 TTGAGTCGATTGATGGCGAG GCCCACATACGACGAAGATT 20 20 50.0 50.0 58.1 58.1 0.0 0.0 0.137506 125390 126187 1468-1468 0.500000 58.9 rpl32-ndhF_p5 rpl32-ndhF 5 CCCACCTTGGAACTTGGAAA GCCCACATACGACGAAGATT 20 20 50.0 50.0 57.9 58.1 0.0 0.0 0.144721 125390 126187 1245-1245 0.500000 58.8 ndhF_p1 ndhF 1 CACCCCTTGCAAAAGAGGTA AGGGTGGAAAGTGAGGAAGA 20 20 50.0 50.0 57.7 57.9 0.0 0.0 0.404768 126188 128455 2673-2673 0.500000 56.8 ndhF_p2 ndhF 2 TTCACCCCTTGCAAAAGAGG AGGGTGGAAAGTGAGGAAGA 20 20 50.0 50.0 58.3 57.9 0.0 0.0 0.414993 126188 128455 2675-2675 0.500000 56.7 ndhF_p3 ndhF 3 CACCCCTTGCAAAAGAGGTA ACAGCTTCCGAAATGAAGGG 20 20 50.0 50.0 57.7 58.2 0.0 3.3 0.459980 126188 128455 2634-2634 0.500000 56.3 ndhF_p4 ndhF 4 TTCACCCCTTGCAAAAGAGG ACAGCTTCCGAAATGAAGGG 20 20 50.0 50.0 58.3 58.2 0.0 3.3 0.470204 126188 128455 2636-2636 0.500000 56.2 ndhF_p5 ndhF 5 CACCCCTTGCAAAAGAGGTA TAGGCAGAATACCCTCACCC 20 20 50.0 55.0 57.7 58.2 0.0 0.0 0.483811 126188 128455 2735-2735 0.500000 56.1