feature_id feature_type parent_gene label_name start end strand length_bp region pi variable_sites indel_sites conserved_left_bp conserved_right_bp primer_available species_resolution unique_haplotype_count species_specific_haplotype_ratio interspecific_divergence alignment_reliability markerseek_score trnH-GUG tRNA trnH-GUG trnH-GUG 12 86 -1 75 LSC 0.000401 2 75 10 5 no 0.029851 7 0.571429 0.000408 0.986667 28.600000 IGS_001 igs trnH-GUG|psbA trnH-GUG-psbA 87 476 0 390 LSC 0.027923 123 390 85 156 yes 0.597015 103 0.776699 0.027921 0.976923 67.800000 psbA gene psbA psbA 477 1538 -1 1062 LSC 0.004130 67 1 5 174 no 0.253731 52 0.653846 0.004130 1.000000 40.000000 IGS_002 igs psbA|trnK-UUU psbA-trnK-UUU 1539 1814 0 276 LSC 0.028657 91 122 236 78 no 0.447761 81 0.740741 0.017446 0.974638 61.800000 trnK-UUU_part2 tRNA trnK-UUU trnK-UUU 1815 1849 -1 35 LSC 0.003254 1 0 3 43 no 0.007463 3 0.333333 0.003254 1.000000 24.200000 matK gene matK matK 2085 3629 -1 1545 LSC 0.010148 221 6 49 89 no 0.492537 88 0.750000 0.010156 1.000000 55.300000 IGS_005 igs matK|trnK-UUU matK-trnK-UUU 3630 4340 0 711 LSC 0.012311 120 38 87 83 no 0.388060 78 0.666667 0.012307 1.000000 62.700000 trnK-UUU_part1 tRNA trnK-UUU trnK-UUU 4341 4377 -1 37 LSC 0.000000 0 0 133 46 no 0.000000 1 0.000000 0.000000 1.000000 22.200000 IGS_006 igs trnK-UUU|rps16 trnK-UUU-rps16 4378 5307 0 930 LSC 0.020978 242 370 170 26 yes 0.582090 99 0.787879 0.020610 0.963441 64.200000 rps16 gene rps16 rps16 5308 6364 -1 1057 LSC 0.008117 127 44 17 9 no 0.447761 83 0.722892 0.008099 1.000000 55.400000 IGS_007 igs rps16|trnQ-UUG rps16-trnQ-UUG 6365 7453 0 1089 LSC 0.015990 237 771 138 75 yes 0.522388 92 0.760870 0.016385 0.982553 64.800000 trnQ-UUG tRNA trnQ-UUG trnQ-UUG 7454 7525 -1 72 LSC 0.001610 2 0 34 3 no 0.014925 4 0.500000 0.001610 1.000000 23.500000 IGS_008 igs trnQ-UUG|psbK trnQ-UUG-psbK 7526 7880 0 355 LSC 0.011895 61 10 106 135 no 0.201493 50 0.540000 0.011622 0.997183 52.800000 psbK gene psbK psbK 7881 8066 1 186 LSC 0.003578 10 0 125 4 no 0.044776 13 0.461538 0.003578 1.000000 28.200000 IGS_009 igs psbK|psbI psbK-psbI 8067 8436 0 370 LSC 0.025355 86 79 50 31 yes 0.611940 104 0.788462 0.022589 0.991892 63.700000 psbI gene psbI psbI 8437 8547 1 111 LSC 0.010150 6 0 14 32 no 0.000000 7 0.000000 0.010150 1.000000 31.100000 IGS_010 igs psbI|trnS-GCU psbI-trnS-GCU 8548 8693 0 146 LSC 0.010548 31 71 30 62 no 0.164179 36 0.611111 0.010459 1.000000 47.100000 trnS-GCU tRNA trnS-GCU trnS-GCU 8694 8781 -1 88 LSC 0.004147 6 0 70 16 no 0.014925 7 0.285714 0.004147 1.000000 30.600000 IGS_011 igs trnS-GCU|trnG-UCC trnS-GCU-trnG-UCC 8782 9560 0 779 LSC 0.017527 163 527 25 29 no 0.567164 97 0.783505 0.016890 0.998716 63.500000 trnG-UCC_part1 tRNA trnG-UCC trnG-UCC 9561 9584 1 24 LSC 0.000622 1 0 26 5 no 0.007463 2 0.500000 0.000622 1.000000 24.800000 trnG-UCC_part2 tRNA trnG-UCC trnG-UCC 10304 10351 1 48 LSC 0.001508 1 0 122 17 no 0.000000 2 0.000000 0.001508 1.000000 23.300000 IGS_014 igs trnG-UCC|trnR-UCU trnG-UCC-trnR-UCU 10352 10528 0 177 LSC 0.026339 40 21 170 102 no 0.194030 46 0.565217 0.026365 1.000000 60.600000 trnR-UCU tRNA trnR-UCU trnR-UCU 10529 10600 1 72 LSC 0.000826 3 1 7 30 no 0.022388 5 0.600000 0.000826 1.000000 27.000000 IGS_015 igs trnR-UCU|atpA trnR-UCU-atpA 10601 10867 0 267 LSC 0.020573 125 231 79 3 no 0.350746 71 0.661972 0.021874 0.951311 50.500000 atpA gene atpA atpA 10868 12391 -1 1524 LSC 0.005114 134 0 86 33 no 0.380597 76 0.671053 0.005114 1.000000 47.900000 IGS_016 igs atpA|atpF atpA-atpF 12392 12443 0 52 LSC 0.018421 17 11 86 6 no 0.082090 20 0.550000 0.018481 1.000000 47.600000 atpF gene atpF atpF 12444 13765 -1 1322 LSC 0.007630 155 53 18 37 no 0.417910 78 0.717949 0.007645 1.000000 55.100000 IGS_017 igs atpF|atpH atpF-atpH 13766 13822 0 57 LSC 0.008479 4 1 300 192 no 0.029851 7 0.571429 0.008446 1.000000 48.400000 atpH gene atpH atpH 13823 14068 -1 246 LSC 0.002988 15 0 19 73 no 0.067164 16 0.562500 0.002988 1.000000 30.400000 IGS_018 igs atpH|atpI atpH-atpI 14069 15216 0 1148 LSC 0.014953 237 255 53 291 yes 0.574627 97 0.793814 0.014621 0.997387 64.800000 atpI gene atpI atpI 15217 15960 -1 744 LSC 0.002551 47 0 0 68 no 0.156716 35 0.600000 0.002551 1.000000 37.000000 IGS_019 igs atpI|rps2 atpI-rps2 15961 16420 0 460 LSC 0.016773 79 197 300 47 yes 0.470149 87 0.724138 0.016174 0.936957 57.800000 rps2 gene rps2 rps2 16421 16492 -1 72 LSC 0.020000 16 0 2 11 no 0.074627 21 0.476190 0.020000 1.000000 41.800000 IGS_020 igs rps2|rpoC2 rps2-rpoC2 16493 16750 0 258 LSC 0.018028 57 111 0 24 no 0.276119 55 0.672727 0.017162 0.996124 49.900000 rpoC2 gene rpoC2 rpoC2 16751 20935 -1 4185 LSC 0.008642 456 53 1 241 no 0.597015 102 0.784314 0.008643 0.999761 49.300000 IGS_021 igs rpoC2|rpoC1 rpoC2-rpoC1 20936 21101 0 166 LSC 0.007154 20 16 204 75 no 0.052239 22 0.318182 0.007128 1.000000 47.200000 rpoC1 gene rpoC1 rpoC1 21102 23826 -1 2725 LSC 0.006045 231 59 300 57 no 0.664179 108 0.824074 0.006015 0.999266 55.100000 IGS_022 igs rpoC1|rpoB rpoC1-rpoB 23827 23852 0 26 LSC 0.003988 4 0 154 31 no 0.022388 5 0.600000 0.003988 1.000000 35.800000 rpoB gene rpoB rpoB 23853 27065 -1 3213 LSC 0.004976 240 0 180 226 no 0.522388 92 0.760870 0.004976 1.000000 56.400000 IGS_023 igs rpoB|trnC-GCA rpoB-trnC-GCA 27066 28230 0 1165 LSC 0.013338 187 368 85 113 yes 0.522388 93 0.752688 0.013434 0.992275 65.300000 trnC-GCA tRNA trnC-GCA trnC-GCA 28231 28311 1 81 LSC 0.001457 4 0 10 32 no 0.014925 5 0.400000 0.001457 1.000000 26.600000 IGS_024 igs trnC-GCA|petN trnC-GCA-petN 28312 28851 0 540 LSC 0.012882 81 266 91 136 no 0.291045 64 0.609375 0.012903 1.000000 60.400000 petN gene petN petN 28852 28941 1 90 LSC 0.001455 4 0 112 46 no 0.022388 5 0.600000 0.001455 1.000000 28.800000 IGS_025 igs petN|psbM petN-psbM 28942 29713 0 772 LSC 0.017487 155 283 202 39 no 0.470149 87 0.724138 0.017427 1.000000 63.000000 psbM gene psbM psbM 29714 29818 -1 105 LSC 0.004615 4 0 64 55 no 0.014925 6 0.333333 0.004615 1.000000 30.000000 IGS_026 igs psbM|trnD-GUC psbM-trnD-GUC 29819 30397 0 579 LSC 0.015851 96 61 65 75 no 0.395522 82 0.646341 0.015496 0.996546 62.500000 trnD-GUC tRNA trnD-GUC trnD-GUC 30398 30471 -1 74 LSC 0.000000 0 0 31 1 no 0.000000 1 0.000000 0.000000 1.000000 18.800000 IGS_027 igs trnD-GUC|trnY-GUA trnD-GUC-trnY-GUA 30472 30923 0 452 LSC 0.013367 78 90 105 89 no 0.343284 67 0.686567 0.013351 1.000000 59.600000 trnY-GUA tRNA trnY-GUA trnY-GUA 30924 31007 -1 84 LSC 0.000703 2 0 46 5 no 0.007463 3 0.333333 0.000703 1.000000 22.600000 IGS_028 igs trnY-GUA|trnE-UUC trnY-GUA-trnE-UUC 31008 31066 0 59 LSC 0.010058 9 0 130 249 no 0.037313 10 0.500000 0.010058 1.000000 46.200000 trnE-UUC tRNA trnE-UUC trnE-UUC 31067 31139 -1 73 LSC 0.002175 3 0 53 176 no 0.007463 4 0.250000 0.002175 1.000000 29.000000 IGS_029 igs trnE-UUC|trnT-GGU trnE-UUC-trnT-GGU 31140 31900 0 761 LSC 0.017598 149 62 126 101 yes 0.373134 76 0.657895 0.017635 0.998686 66.100000 trnT-GGU tRNA trnT-GGU trnT-GGU 31901 31972 1 72 LSC 0.000415 2 0 1 29 no 0.014925 3 0.666667 0.000415 1.000000 22.800000 trnM-CAU tRNA trnM-CAU trnM-CAU 31907 31965 1 59 LSC 0.000506 2 0 7 36 no 0.014925 3 0.666667 0.000506 1.000000 24.000000 IGS_031 igs trnM-CAU|psbD trnM-CAU-psbD 31966 33468 0 1503 LSC 0.013168 257 199 66 300 yes 0.589552 98 0.806122 0.013326 0.990020 65.100000 psbD gene psbD psbD 33469 34530 1 1062 LSC 0.002706 42 0 272 18 no 0.126866 38 0.447368 0.002706 1.000000 34.900000 psbC gene psbC psbC 34478 35899 1 1422 LSC 0.003098 67 0 58 11 no 0.261194 51 0.686275 0.003098 1.000000 38.000000 IGS_033 igs psbC|trnS-UGA psbC-trnS-UGA 35900 36142 0 243 LSC 0.017441 45 119 87 300 no 0.201493 48 0.562500 0.017498 1.000000 55.300000 trnS-UGA tRNA trnS-UGA trnS-UGA 36143 36235 -1 93 LSC 0.000000 0 0 6 242 no 0.000000 1 0.000000 0.000000 1.000000 19.200000 IGS_034 igs trnS-UGA|psbZ trnS-UGA-psbZ 36236 36587 0 352 LSC 0.009241 53 43 99 49 no 0.231343 54 0.574074 0.009265 1.000000 50.700000 psbZ gene psbZ psbZ 36588 36776 1 189 LSC 0.007807 16 0 23 12 no 0.059701 19 0.421053 0.007807 1.000000 34.900000 IGS_035 igs psbZ|trnG-GCC psbZ-trnG-GCC 36777 37344 0 568 LSC 0.033771 145 265 126 155 yes 0.514925 90 0.766667 0.033437 0.987676 76.000000 trnG-GCC tRNA trnG-GCC trnG-GCC 37345 37415 1 71 LSC 0.002444 3 0 28 84 no 0.007463 4 0.250000 0.002444 1.000000 27.400000 IGS_036 igs trnG-GCC|trnfM-CAU trnG-GCC-trnfM-CAU 37416 37579 0 164 LSC 0.012536 37 8 99 218 no 0.179104 42 0.571429 0.011207 0.993902 53.500000 trnfM-CAU tRNA trnfM-CAU trnfM-CAU 37580 37653 -1 74 LSC 0.000000 0 0 17 144 no 0.000000 1 0.000000 0.000000 1.000000 20.000000 IGS_037 igs trnfM-CAU|rps14 trnfM-CAU-rps14 37654 37822 0 169 LSC 0.005384 25 27 91 9 no 0.119403 26 0.615385 0.005583 0.964497 41.300000 rps14 gene rps14 rps14 37823 38125 -1 303 LSC 0.004993 19 1 24 58 no 0.052239 21 0.333333 0.005010 0.996700 32.000000 IGS_038 igs rps14|psaB rps14-psaB 38126 38270 0 145 LSC 0.010503 17 22 147 87 no 0.059701 17 0.470588 0.010595 1.000000 49.800000 psaB gene psaB psaB 38271 40475 -1 2205 LSC 0.002969 99 0 5 300 no 0.313433 64 0.656250 0.002969 1.000000 36.700000 IGS_039 igs psaB|psaA psaB-psaA 40476 40500 0 25 LSC 0.001764 1 0 300 300 no 0.000000 2 0.000000 0.001764 1.000000 39.500000 psaA gene psaA psaA 40501 42753 -1 2253 LSC 0.003880 114 0 300 89 no 0.320896 68 0.632353 0.003880 1.000000 44.200000 IGS_040 igs psaA|ycf3 psaA-ycf3 42754 43485 0 732 LSC 0.011020 94 99 113 150 no 0.380597 75 0.680000 0.011124 0.987705 63.400000 ycf3 gene ycf3 ycf3 43486 45445 -1 1960 LSC 0.006485 156 18 92 124 no 0.395522 81 0.654321 0.006490 1.000000 52.400000 IGS_041 igs ycf3|trnS-GGA ycf3-trnS-GGA 45446 46338 0 893 LSC 0.012366 137 498 220 98 no 0.365672 78 0.628205 0.012344 0.992161 62.900000 trnS-GGA tRNA trnS-GGA trnS-GGA 46339 46425 1 87 LSC 0.001669 3 0 123 11 no 0.007463 4 0.250000 0.001669 1.000000 24.800000 IGS_042 igs trnS-GGA|rps4 trnS-GGA-rps4 46426 46644 0 219 LSC 0.010959 38 18 210 100 no 0.164179 39 0.564103 0.010992 1.000000 52.800000 rps4 gene rps4 rps4 46645 47250 -1 606 LSC 0.004380 37 0 110 73 no 0.149254 40 0.500000 0.004380 1.000000 42.900000 IGS_043 igs rps4|trnT-UGU rps4-trnT-UGU 47251 47600 0 350 LSC 0.013979 52 76 300 111 no 0.223881 52 0.576923 0.014011 1.000000 57.300000 trnT-UGU tRNA trnT-UGU trnT-UGU 47601 47673 -1 73 LSC 0.001181 1 0 20 38 no 0.000000 2 0.000000 0.001181 1.000000 22.500000 IGS_044 igs trnT-UGU|trnL-UAA trnT-UGU-trnL-UAA 47674 48618 0 945 LSC 0.012983 158 511 93 176 yes 0.582090 95 0.821053 0.012815 0.998942 66.200000 trnL-UAA_part1 tRNA trnL-UAA trnL-UAA 48619 48655 1 37 LSC 0.000000 0 0 38 139 no 0.000000 1 0.000000 0.000000 1.000000 21.600000 trnL-UAA_part2 tRNA trnL-UAA trnL-UAA 49176 49224 1 49 LSC 0.000305 1 2 82 53 no 0.014925 3 0.666667 0.000305 1.000000 30.800000 IGS_047 igs trnL-UAA|trnF-GAA trnL-UAA-trnF-GAA 49225 49570 0 346 LSC 0.013580 72 49 131 87 no 0.343284 72 0.638889 0.013558 0.997110 57.200000 trnF-GAA tRNA trnF-GAA trnF-GAA 49571 49643 1 73 LSC 0.000000 0 0 20 14 no 0.000000 1 0.000000 0.000000 1.000000 19.800000 IGS_048 igs trnF-GAA|ndhJ trnF-GAA-ndhJ 49644 50382 0 739 LSC 0.011354 119 262 93 198 no 0.440299 85 0.694118 0.010641 0.987821 63.300000 ndhJ gene ndhJ ndhJ 50383 50859 -1 477 LSC 0.002275 27 0 88 79 no 0.134328 29 0.620690 0.002275 1.000000 39.000000 IGS_049 igs ndhJ|ndhK ndhJ-ndhK 50860 50971 0 112 LSC 0.014599 23 2 278 8 no 0.126866 29 0.586207 0.014601 1.000000 43.000000 ndhK gene ndhK ndhK 50972 51661 -1 690 LSC 0.006629 60 0 4 15 no 0.186567 49 0.510204 0.006629 1.000000 42.700000 IGS_050 igs ndhK|ndhC ndhK-ndhC 51662 51720 0 59 LSC 0.022151 14 8 233 15 no 0.082090 25 0.440000 0.022078 1.000000 50.000000 ndhC gene ndhC ndhC 51721 52083 -1 363 LSC 0.008230 29 0 11 19 no 0.082090 27 0.407407 0.008230 1.000000 36.100000 IGS_051 igs ndhC|trnV-UAC ndhC-trnV-UAC 52084 53007 0 924 LSC 0.022932 216 374 62 52 yes 0.440299 85 0.694118 0.023304 0.964286 64.200000 trnV-UAC_part2 tRNA trnV-UAC trnV-UAC 53008 53044 -1 37 LSC 0.000000 0 0 16 15 no 0.000000 1 0.000000 0.000000 1.000000 19.900000 trnV-UAC_part1 tRNA trnV-UAC trnV-UAC 53633 53671 -1 39 LSC 0.000765 2 1 45 32 no 0.022388 4 0.750000 0.000766 1.000000 31.500000 IGS_054 igs trnV-UAC|trnM-CAU trnV-UAC-trnM-CAU 53672 53848 0 177 LSC 0.013699 32 7 84 40 no 0.141791 32 0.593750 0.013685 1.000000 48.000000 trnM-CAU tRNA trnM-CAU trnM-CAU 53849 53920 1 72 LSC 0.004048 2 0 8 83 no 0.007463 3 0.333333 0.004048 1.000000 24.800000 trnT-GGU tRNA trnT-GGU trnT-GGU 53854 53912 1 59 LSC 0.004940 2 0 13 91 no 0.007463 3 0.333333 0.004940 1.000000 26.300000 IGS_056 igs trnT-GGU|atpE trnT-GGU-atpE 53913 54152 0 240 LSC 0.015231 47 217 23 27 no 0.261194 52 0.673077 0.015200 1.000000 50.700000 atpE gene atpE atpE 54153 54554 -1 402 LSC 0.004009 33 231 34 91 no 0.156716 35 0.600000 0.004080 1.000000 44.500000 atpB gene atpB atpB 54551 56047 -1 1497 LSC 0.004866 112 17 46 27 no 0.343284 74 0.621622 0.004867 1.000000 46.400000 IGS_058 igs atpB|rbcL atpB-rbcL 56048 56823 0 776 LSC 0.013080 120 171 248 14 no 0.410448 77 0.714286 0.011824 0.987113 57.700000 rbcL gene rbcL rbcL 56824 58251 1 1428 LSC 0.005398 81 0 108 17 no 0.305970 65 0.630769 0.005398 1.000000 41.500000 IGS_059 igs rbcL|accD rbcL-accD 58252 58819 0 568 LSC 0.007959 71 31 47 23 no 0.291045 64 0.609375 0.007943 1.000000 53.800000 accD gene accD accD 58820 60301 1 1482 LSC 0.007542 159 0 68 5 no 0.410448 78 0.705128 0.007542 1.000000 49.000000 IGS_060 igs accD|psaI accD-psaI 60302 61007 0 706 LSC 0.015268 129 341 39 27 no 0.402985 86 0.627907 0.014421 0.977337 59.000000 psaI gene psaI psaI 61008 61121 1 114 LSC 0.007540 7 0 15 88 no 0.014925 9 0.222222 0.007540 1.000000 31.200000 IGS_061 igs psaI|ycf4 psaI-ycf4 61122 61537 0 416 LSC 0.014214 71 73 86 41 no 0.402985 81 0.666667 0.013020 0.995192 56.500000 ycf4 gene ycf4 ycf4 61538 62092 1 555 LSC 0.005586 44 1 13 57 no 0.194030 41 0.634146 0.005586 1.000000 41.300000 IGS_062 igs ycf4|cemA ycf4-cemA 62093 62682 0 590 LSC 0.015910 117 279 15 86 no 0.477612 87 0.735632 0.015574 0.994915 60.200000 cemA gene cemA cemA 62683 63381 1 699 LSC 0.006241 65 0 87 300 no 0.186567 46 0.543478 0.006241 1.000000 49.500000 IGS_063 igs cemA|petA cemA-petA 63382 63586 0 205 LSC 0.008753 39 7 216 300 no 0.134328 36 0.500000 0.008772 1.000000 57.000000 petA gene petA petA 63587 64549 1 963 LSC 0.005273 72 22 300 21 no 0.268657 56 0.642857 0.005274 1.000000 46.200000 IGS_064 igs petA|psbJ petA-psbJ 64550 65311 0 762 LSC 0.015622 144 189 84 230 yes 0.529851 93 0.763441 0.015343 1.000000 66.600000 psbJ gene psbJ psbJ 65312 65434 -1 123 LSC 0.001423 5 0 13 107 no 0.022388 6 0.500000 0.001423 1.000000 25.900000 IGS_065 igs psbJ|psbL psbJ-psbL 65435 65583 0 149 LSC 0.005846 14 20 136 124 no 0.029851 15 0.266667 0.005855 1.000000 49.100000 psbL gene psbL psbL 65584 65700 -1 117 LSC 0.001114 2 0 41 7 no 0.000000 3 0.000000 0.001114 1.000000 21.900000 IGS_066 igs psbL|psbF psbL-psbF 65701 65722 0 22 LSC 0.012150 2 0 158 300 no 0.000000 3 0.000000 0.012150 1.000000 47.400000 psbF gene psbF psbF 65723 65842 -1 120 LSC 0.000124 1 0 14 296 no 0.007463 2 0.500000 0.000124 1.000000 21.000000 IGS_067 igs psbF|psbE psbF-psbE 65843 65851 0 9 LSC 0.001658 1 0 134 287 no 0.007463 2 0.500000 NA 1.000000 42.200000 psbE gene psbE psbE 65852 66103 -1 252 LSC 0.002280 12 0 143 35 no 0.037313 11 0.454545 0.002280 1.000000 29.100000 IGS_068 igs psbE|petL psbE-petL 66104 66864 0 761 LSC 0.011395 132 291 300 47 no 0.447761 83 0.722892 0.011378 0.997372 60.400000 petL gene petL petL 66865 66960 1 96 LSC 0.005052 7 0 76 32 no 0.037313 8 0.625000 0.005052 1.000000 33.200000 IGS_069 igs petL|petG petL-petG 66961 67143 0 183 LSC 0.013275 34 9 48 167 no 0.126866 35 0.485714 0.013309 1.000000 49.300000 petG gene petG petG 67144 67257 1 114 LSC 0.002870 6 0 8 53 no 0.014925 7 0.285714 0.002870 1.000000 27.500000 IGS_070 igs petG|trnW-CCA petG-trnW-CCA 67258 67400 0 143 LSC 0.021862 29 37 122 142 no 0.223881 53 0.566038 0.016531 0.979021 59.600000 trnW-CCA tRNA trnW-CCA trnW-CCA 67401 67474 -1 74 LSC 0.000596 1 0 77 68 no 0.000000 2 0.000000 0.000596 1.000000 25.800000 IGS_071 igs trnW-CCA|trnP-UGG trnW-CCA-trnP-UGG 67475 67670 0 196 LSC 0.013712 33 39 151 76 no 0.141791 41 0.463415 0.013707 1.000000 52.000000 trnP-UGG tRNA trnP-UGG trnP-UGG 67671 67744 -1 74 LSC 0.000000 0 0 10 2 no 0.000000 1 0.000000 0.000000 1.000000 18.900000 trnP-GGG tRNA trnP-GGG trnP-GGG 67673 67743 -1 71 LSC 0.000000 0 0 12 3 no 0.000000 1 0.000000 0.000000 1.000000 19.000000 IGS_073 igs trnP-GGG|psaJ trnP-GGG-psaJ 67744 68106 0 363 LSC 0.018975 60 47 83 32 no 0.238806 53 0.603774 0.018985 0.966942 52.700000 psaJ gene psaJ psaJ 68107 68241 1 135 LSC 0.005688 8 13 63 161 no 0.037313 11 0.454545 0.005675 1.000000 40.400000 IGS_074 igs psaJ|rpl33 psaJ-rpl33 68242 68666 0 425 LSC 0.007805 48 68 66 5 no 0.223881 50 0.600000 0.007887 1.000000 47.900000 rpl33 gene rpl33 rpl33 68667 68867 1 201 LSC 0.007427 20 0 41 14 no 0.104478 23 0.608696 0.007427 1.000000 37.500000 IGS_075 igs rpl33|rps18 rpl33-rps18 68868 69065 0 198 LSC 0.007962 24 7 60 300 no 0.119403 32 0.500000 0.008019 0.994949 45.800000 rps18 gene rps18 rps18 69066 69371 1 306 LSC 0.001520 11 0 140 86 no 0.044776 13 0.461538 0.001520 1.000000 31.300000 IGS_076 igs rps18|rpl20 rps18-rpl20 69372 69635 0 264 LSC 0.013100 46 48 300 54 no 0.186567 46 0.543478 0.013059 1.000000 50.900000 rpl20 gene rpl20 rpl20 69636 69989 -1 354 LSC 0.007117 33 7 9 31 no 0.141791 33 0.575758 0.007119 1.000000 40.500000 IGS_077 igs rpl20|rps12 rpl20-rps12 69990 70717 0 728 LSC 0.009501 104 25 32 45 no 0.328358 66 0.666667 0.009599 0.989011 54.100000 rps12_part1 gene rps12 rps12 70718 70831 -1 114 LSC 0.003322 7 0 18 53 no 0.022388 8 0.375000 0.003322 1.000000 29.700000 IGS_078 igs rps12|clpP rps12-clpP 70832 71046 0 215 LSC 0.012130 25 77 68 300 no 0.119403 28 0.571429 0.012415 0.762791 41.100000 clpP gene clpP clpP 71047 73076 -1 2030 LSC 0.007372 208 179 28 146 no 0.604478 103 0.786408 0.007406 0.999507 59.200000 IGS_079 igs clpP|psbB clpP-psbB 73077 73506 0 430 LSC 0.007893 41 14 23 149 no 0.261194 60 0.583333 0.007606 0.997674 47.500000 psbB gene psbB psbB 73507 75033 1 1527 LSC 0.003194 89 0 75 33 no 0.246269 59 0.559322 0.003194 1.000000 40.800000 IGS_080 igs psbB|psbT psbB-psbT 75034 75223 0 190 LSC 0.008812 26 10 141 77 no 0.119403 30 0.533333 0.008831 1.000000 49.400000 psbT gene psbT psbT 75224 75325 1 102 LSC 0.004033 3 0 4 42 no 0.014925 4 0.500000 0.004033 1.000000 24.800000 IGS_081 igs psbT|psbN psbT-psbN 75326 75390 0 65 LSC 0.020158 9 0 24 69 no 0.037313 11 0.454545 0.020158 1.000000 42.800000 psbN gene psbN psbN 75391 75522 -1 132 LSC 0.004148 9 0 9 229 no 0.059701 13 0.615385 0.004148 1.000000 30.900000 IGS_082 igs psbN|psbH psbN-psbH 75523 75626 0 104 LSC 0.004522 7 0 62 125 no 0.007463 8 0.125000 0.004522 1.000000 34.000000 psbH gene psbH psbH 75627 75848 1 222 LSC 0.003539 15 0 166 72 no 0.052239 16 0.437500 0.003539 1.000000 35.200000 IGS_083 igs psbH|petB psbH-petB 75849 75978 0 130 LSC 0.005588 12 1 96 44 no 0.067164 16 0.562500 0.005631 0.992308 38.000000 petB gene petB petB 75979 77421 1 1443 LSC 0.007520 124 53 57 27 no 0.417910 81 0.691358 0.007303 1.000000 53.500000 IGS_084 igs petB|petD petB-petD 77422 77618 0 197 LSC 0.009620 28 8 300 121 no 0.126866 31 0.548387 0.009628 1.000000 52.100000 petD gene petD petD 77619 78834 1 1216 LSC 0.007257 120 66 91 155 no 0.477612 87 0.735632 0.006299 0.998355 62.500000 IGS_085 igs petD|rpoA petD-rpoA 78835 79064 0 230 LSC 0.013651 35 88 147 28 no 0.186567 43 0.581395 0.013270 1.000000 48.700000 rpoA gene rpoA rpoA 79065 80048 -1 984 LSC 0.006134 87 11 14 300 no 0.298507 65 0.615385 0.006136 1.000000 46.800000 IGS_086 igs rpoA|rps11 rpoA-rps11 80049 80112 0 64 LSC 0.005192 7 0 248 300 no 0.029851 9 0.444444 0.005192 1.000000 49.100000 rps11 gene rps11 rps11 80113 80529 -1 417 LSC 0.004636 37 0 300 14 no 0.134328 34 0.529412 0.004636 1.000000 37.900000 IGS_087 igs rps11|rpl36 rps11-rpl36 80530 80646 0 117 LSC 0.013732 20 0 300 95 no 0.104478 25 0.560000 0.013732 1.000000 46.500000 rpl36 gene rpl36 rpl36 80647 80760 -1 114 LSC 0.004138 8 0 32 53 no 0.029851 9 0.444444 0.004138 1.000000 32.300000 IGS_088 igs rpl36|infA rpl36-infA 80761 80875 0 115 LSC 0.011698 14 6 18 31 no 0.067164 19 0.473684 0.011695 1.000000 45.400000 infA gene infA infA 80876 81116 -1 241 LSC 0.016136 55 68 31 25 no 0.328358 73 0.602740 0.015268 0.991701 52.100000 IGS_089 igs infA|rps8 infA-rps8 81117 81239 0 123 LSC 0.011852 25 9 26 41 no 0.119403 25 0.640000 0.011868 1.000000 47.000000 rps8 gene rps8 rps8 81240 81644 -1 405 LSC 0.009706 39 0 68 8 no 0.164179 38 0.578947 0.009706 1.000000 41.000000 IGS_090 igs rps8|rpl14 rps8-rpl14 81645 81803 0 159 LSC 0.011743 24 9 102 78 no 0.097015 28 0.464286 0.011751 1.000000 50.400000 rpl14 gene rpl14 rpl14 81804 82172 -1 369 LSC 0.006420 33 0 50 3 no 0.134328 34 0.529412 0.006420 1.000000 37.000000 IGS_091 igs rpl14|rpl16 rpl14-rpl16 82173 82300 0 128 LSC 0.012843 25 20 53 39 no 0.246269 49 0.673469 0.013000 1.000000 50.600000 rpl16 gene rpl16 rpl16 82301 83766 -1 1466 LSC 0.010498 207 294 112 25 no 0.485075 88 0.738636 0.010424 0.997954 59.200000 IGS_092 igs rpl16|rps3 rpl16-rps3 83767 83919 0 153 LSC 0.012297 30 20 31 78 no 0.156716 33 0.636364 0.012320 1.000000 48.300000 rps3 gene rps3 rps3 83920 84582 -1 663 LSC 0.004846 57 0 29 2 no 0.246269 50 0.660000 0.004846 1.000000 42.700000 rpl22 gene rpl22 rpl22 84567 85055 -1 489 LSC 0.012781 89 43 196 257 yes 0.291045 61 0.639344 0.012733 1.000000 67.300000 IGS_094 igs rpl22|rps19 rpl22-rps19 85056 85093 0 38 LSC 0.009396 7 22 19 219 no 0.044776 11 0.545455 0.009717 1.000000 43.800000 rps19 gene rps19 rps19 85094 85372 -1 279 LSC 0.006134 25 0 57 42 no 0.097015 27 0.481481 0.006134 1.000000 37.700000 IGS_095 igs rps19|rpl2 rps19-rpl2 85373 85432 0 60 IRb 0.023630 12 18 23 300 no 0.082090 25 0.440000 0.023418 1.000000 51.100000 rpl2 gene rpl2 rpl2 85433 86921 -1 1489 IRb 0.000524 28 6 11 300 no 0.119403 28 0.571429 0.000524 1.000000 31.200000 IGS_096 igs rpl2|rpl23 rpl2-rpl23 86922 86939 0 18 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl23 gene rpl23 rpl23 86940 87221 -1 282 IRb 0.000359 2 0 300 300 no 0.007463 3 0.333333 0.000359 1.000000 34.900000 IGS_097 igs rpl23|trnI-CAU rpl23-trnI-CAU 87222 87386 0 165 IRb 0.000180 1 0 300 300 no 0.000000 2 0.000000 0.000180 1.000000 34.600000 trnI-CAU tRNA trnI-CAU trnI-CAU 87387 87460 -1 74 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_098 igs trnI-CAU|ycf2 trnI-CAU-ycf2 87461 87548 0 88 IRb 0.001149 2 0 300 300 no 0.007463 3 0.333333 0.001149 1.000000 37.200000 ycf2 gene ycf2 ycf2 87549 94391 1 6843 IRb 0.001692 177 42 300 300 no 0.380597 80 0.637500 0.001692 1.000000 45.600000 IGS_099 igs ycf2|trnL-CAA ycf2-trnL-CAA 94392 94954 0 563 IRb 0.004466 20 18 300 300 no 0.074627 21 0.476190 0.004470 1.000000 51.100000 trnL-CAA tRNA trnL-CAA trnL-CAA 94955 95035 -1 81 IRb 0.000000 0 0 51 300 no 0.000000 1 0.000000 0.000000 1.000000 22.600000 IGS_100 igs trnL-CAA|ndhB trnL-CAA-ndhB 95036 95621 0 586 IRb 0.001169 18 6 132 300 no 0.089552 20 0.600000 0.001169 1.000000 41.900000 ndhB gene ndhB ndhB 95622 97836 -1 2215 IRb 0.001137 41 0 300 300 no 0.111940 34 0.441176 0.001137 1.000000 43.400000 IGS_101 igs ndhB|rps7 ndhB-rps7 97837 98166 0 330 IRb 0.000535 7 0 300 300 no 0.037313 8 0.625000 0.000535 1.000000 38.000000 rps7 gene rps7 rps7 98167 98634 -1 468 IRb 0.000375 5 0 300 300 no 0.014925 5 0.400000 0.000375 1.000000 39.000000 IGS_102 igs rps7|rps12 rps7-rps12 98635 98687 0 53 IRb 0.003204 2 0 300 300 no 0.007463 4 0.250000 0.003204 1.000000 40.000000 rps12_part2 gene rps12 rps12 98688 99491 -1 804 IRb 0.000664 29 10 300 300 no 0.067164 15 0.600000 0.000664 1.000000 47.600000 IGS_103 igs rps12|ycf15 rps12-ycf15 99492 100505 0 1014 IRb 0.001752 37 72 300 70 no 0.164179 41 0.536585 0.001426 0.999014 44.800000 ycf15 gene ycf15 ycf15 100506 100697 -1 192 IRb 0.001954 4 0 300 205 no 0.007463 5 0.200000 0.001954 1.000000 37.400000 IGS_104 igs ycf15|trnV-GAC ycf15-trnV-GAC 100698 101300 0 603 IRb 0.003049 23 35 121 300 no 0.097015 25 0.520000 0.003052 1.000000 48.300000 trnV-GAC tRNA trnV-GAC trnV-GAC 101301 101372 1 72 IRb 0.000000 0 0 254 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_105 igs trnV-GAC|rrn16 trnV-GAC-rrn16 101373 101605 0 233 IRb 0.002356 11 1 300 300 no 0.037313 14 0.357143 0.002358 1.000000 41.900000 rrn16 rRNA rrn16 rrn16 101606 103096 1 1491 IRb 0.000000 0 0 300 69 no 0.000000 1 0.000000 0.000000 1.000000 30.200000 IGS_106 igs rrn16|trnI-GAU rrn16-trnI-GAU 103097 103390 0 294 IRb 0.005108 17 0 300 300 no 0.022388 11 0.272727 0.005108 1.000000 43.700000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 103391 103432 1 42 IRb 0.002052 1 0 224 300 no 0.000000 2 0.000000 0.002052 1.000000 37.600000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 104386 104420 1 35 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_109 igs trnI-GAU|trnA-UGC trnI-GAU-trnA-UGC 104421 104484 0 64 IRb 0.000000 0 5 300 300 no 0.000000 2 0.000000 0.000000 1.000000 40.000000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 104485 104522 1 38 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 orf42 gene orf42 orf42 104652 104795 -1 144 IRb 0.001301 3 0 300 229 no 0.007463 4 0.250000 0.001301 1.000000 37.100000 IGS_112 igs orf42|trnA-UGC orf42-trnA-UGC 104796 105328 0 533 IRb 0.003687 17 10 300 300 no 0.059701 21 0.380952 0.003688 1.000000 47.700000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 105329 105363 1 35 IRb 0.000000 0 0 174 300 no 0.000000 1 0.000000 0.000000 1.000000 31.800000 IGS_113 igs trnA-UGC|rrn23 trnA-UGC-rrn23 105364 105519 0 156 IRb 0.001303 6 0 209 300 no 0.029851 7 0.571429 0.001303 1.000000 39.700000 rrn23 rRNA rrn23 rrn23 105520 108329 1 2810 IRb 0.000215 13 0 300 300 no 0.044776 13 0.461538 0.000215 1.000000 38.800000 IGS_114 igs rrn23|rrn4.5 rrn23-rrn4.5 108330 108427 0 98 IRb 0.000152 1 0 300 300 no 0.007463 2 0.500000 0.000152 1.000000 35.200000 rrn4.5 rRNA rrn4.5 rrn4.5 108428 108530 1 103 IRb 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_115 igs rrn4.5|rrn5 rrn4.5-rrn5 108531 108746 0 216 IRb 0.000750 5 4 300 193 no 0.022388 7 0.428571 0.000750 1.000000 39.200000 rrn5 rRNA rrn5 rrn5 108747 108867 1 121 IRb 0.000123 1 0 300 72 no 0.007463 2 0.500000 0.000123 1.000000 25.400000 IGS_116 igs rrn5|trnR-ACG rrn5-trnR-ACG 108868 109125 0 258 IRb 0.002474 9 48 300 83 no 0.082090 28 0.392857 0.002550 0.980620 37.400000 trnR-ACG tRNA trnR-ACG trnR-ACG 109126 109199 1 74 IRb 0.000000 0 0 185 9 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_117 igs trnR-ACG|trnN-GUU trnR-ACG-trnN-GUU 109200 109750 0 551 IRb 0.004117 29 4 259 96 no 0.074627 29 0.344828 0.004125 0.998185 41.800000 trnN-GUU tRNA trnN-GUU trnN-GUU 109751 109822 -1 72 IRb 0.001197 1 0 300 24 no 0.000000 2 0.000000 0.001197 1.000000 22.800000 IGS_118 igs trnN-GUU|ycf1 trnN-GUU-ycf1 109823 110157 0 335 IRb 0.002121 11 15 300 300 no 0.029851 13 0.307692 0.002122 1.000000 45.700000 ycf1 gene ycf1 ycf1 110158 111456 1 1299 IRb 0.002599 48 95 300 35 no 0.208955 46 0.608696 0.002505 1.000000 43.500000 ndhF gene ndhF ndhF 111390 113651 -1 2262 SSC 0.011353 307 65 74 67 no 0.537313 93 0.774194 0.011306 1.000000 59.700000 IGS_120 igs ndhF|rpl32 ndhF-rpl32 113652 114390 0 739 SSC 0.020442 171 413 43 65 yes 0.492537 90 0.733333 0.019155 0.985115 64.500000 rpl32 gene rpl32 rpl32 114391 114543 1 153 SSC 0.016720 23 0 24 1 no 0.111940 28 0.535714 0.016720 1.000000 40.900000 IGS_121 igs rpl32|trnL-UAG rpl32-trnL-UAG 114544 115620 0 1077 SSC 0.030388 319 359 67 101 yes 0.701493 111 0.846847 0.029822 0.985144 74.600000 trnL-UAG tRNA trnL-UAG trnL-UAG 115621 115700 1 80 SSC 0.001988 3 0 44 21 no 0.000000 3 0.000000 0.001988 1.000000 25.900000 IGS_122 igs trnL-UAG|ccsA trnL-UAG-ccsA 115701 115810 0 110 SSC 0.019535 29 8 124 55 no 0.134328 31 0.580645 0.019518 1.000000 52.900000 ccsA gene ccsA ccsA 115811 116767 1 957 SSC 0.007146 113 0 11 22 no 0.335821 69 0.652174 0.007146 1.000000 47.800000 IGS_123 igs ccsA|ndhD ccsA-ndhD 116768 116963 0 196 SSC 0.046665 43 5 150 284 yes 0.246269 52 0.634615 0.046720 1.000000 71.200000 ndhD gene ndhD ndhD 116964 118496 -1 1533 SSC 0.006424 141 0 12 19 no 0.402985 80 0.675000 0.006424 1.000000 47.800000 IGS_124 igs ndhD|psaC ndhD-psaC 118497 118646 0 150 SSC 0.015863 34 22 182 256 no 0.201493 51 0.529412 0.015066 1.000000 61.500000 psaC gene psaC psaC 118647 118892 -1 246 SSC 0.002226 12 0 14 10 no 0.037313 11 0.454545 0.002226 1.000000 27.300000 IGS_125 igs psaC|ndhE psaC-ndhE 118893 119135 0 243 SSC 0.018638 45 4 260 36 no 0.194030 46 0.565217 0.018465 1.000000 48.000000 ndhE gene ndhE ndhE 119136 119441 -1 306 SSC 0.005856 25 0 28 62 no 0.044776 22 0.272727 0.005856 1.000000 34.700000 IGS_126 igs ndhE|ndhG ndhE-ndhG 119442 119673 0 232 SSC 0.019957 41 37 73 48 no 0.194030 49 0.530612 0.019424 1.000000 53.300000 ndhG gene ndhG ndhG 119674 120210 -1 537 SSC 0.006707 53 0 23 151 no 0.164179 41 0.536585 0.006707 1.000000 43.800000 IGS_127 igs ndhG|ndhI ndhG-ndhI 120211 120567 0 357 SSC 0.009948 56 16 294 33 no 0.238806 50 0.640000 0.008798 0.997199 49.300000 ndhI gene ndhI ndhI 120568 121071 -1 504 SSC 0.007430 35 0 113 14 no 0.119403 37 0.432432 0.007430 1.000000 38.300000 IGS_128 igs ndhI|ndhA ndhI-ndhA 121072 121148 0 77 SSC 0.024918 22 6 3 0 no 0.134328 35 0.514286 0.021672 1.000000 50.900000 ndhA gene ndhA ndhA 121149 123312 -1 2164 SSC 0.010636 257 131 9 118 no 0.686567 110 0.836364 0.010043 0.997689 60.500000 IGS_129 igs ndhA|ndhH ndhA-ndhH 123313 123313 0 1 SSC 0.000000 0 0 8 117 no 0.000000 1 0.000000 NA 1.000000 19.400000 ndhH gene ndhH ndhH 123314 124495 -1 1182 SSC 0.006009 97 0 9 0 no 0.291045 65 0.600000 0.006009 1.000000 43.400000 IGS_130 igs ndhH|rps15 ndhH-rps15 124496 124598 0 103 SSC 0.011763 19 1 47 21 no 0.097015 26 0.500000 0.011731 1.000000 41.100000 rps15 gene rps15 rps15 124599 124871 -1 273 SSC 0.007675 26 0 102 9 no 0.126866 27 0.629630 0.007675 1.000000 37.200000 IGS_131 igs rps15|ycf1 rps15-ycf1 124872 125238 0 367 SSC 0.017088 82 192 56 194 no 0.276119 63 0.587302 0.017065 1.000000 55.200000 ycf1 gene ycf1 ycf1 125239 130749 -1 5511 SSC 0.011937 881 153 3 300 yes 0.656716 107 0.822430 0.011933 0.998911 52.600000 IGS_132 igs ycf1|trnN-GUU ycf1-trnN-GUU 130750 131084 0 335 IRa 0.002121 11 15 300 300 no 0.029851 13 0.307692 0.002122 1.000000 45.700000 trnN-GUU tRNA trnN-GUU trnN-GUU 131085 131156 1 72 IRa 0.001197 1 0 24 300 no 0.000000 2 0.000000 0.001197 1.000000 22.800000 IGS_133 igs trnN-GUU|trnR-ACG trnN-GUU-trnR-ACG 131157 131707 0 551 IRa 0.004197 30 3 96 259 no 0.082090 29 0.379310 0.004205 0.998185 42.000000 trnR-ACG tRNA trnR-ACG trnR-ACG 131708 131781 -1 74 IRa 0.000000 0 0 9 185 no 0.000000 1 0.000000 0.000000 1.000000 19.400000 IGS_134 igs trnR-ACG|rrn5 trnR-ACG-rrn5 131782 132039 0 258 IRa 0.002298 7 42 83 300 no 0.104478 32 0.437500 0.002368 0.980620 36.800000 rrn5 rRNA rrn5 rrn5 132040 132160 -1 121 IRa 0.000123 1 0 72 300 no 0.007463 2 0.500000 0.000123 1.000000 25.400000 IGS_135 igs rrn5|rrn4.5 rrn5-rrn4.5 132161 132376 0 216 IRa 0.000750 5 4 193 300 no 0.022388 7 0.428571 0.000750 1.000000 39.200000 rrn4.5 rRNA rrn4.5 rrn4.5 132377 132479 -1 103 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_136 igs rrn4.5|rrn23 rrn4.5-rrn23 132480 132577 0 98 IRa 0.000152 1 0 300 300 no 0.007463 2 0.500000 0.000152 1.000000 35.200000 rrn23 rRNA rrn23 rrn23 132578 135387 -1 2810 IRa 0.000215 13 0 300 300 no 0.044776 13 0.461538 0.000215 1.000000 38.800000 IGS_137 igs rrn23|trnA-UGC rrn23-trnA-UGC 135388 135543 0 156 IRa 0.001398 7 0 300 209 no 0.037313 8 0.625000 0.001398 1.000000 40.700000 trnA-UGC_part2 tRNA trnA-UGC trnA-UGC 135544 135578 -1 35 IRa 0.000000 0 0 300 174 no 0.000000 1 0.000000 0.000000 1.000000 31.800000 orf42 gene orf42 orf42 136112 136255 1 144 IRa 0.001301 3 0 229 300 no 0.007463 4 0.250000 0.001301 1.000000 37.100000 IGS_140 igs orf42|trnA-UGC orf42-trnA-UGC 136256 136384 0 129 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnA-UGC_part1 tRNA trnA-UGC trnA-UGC 136385 136422 -1 38 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_141 igs trnA-UGC|trnI-GAU trnA-UGC-trnI-GAU 136423 136486 0 64 IRa 0.000000 0 5 300 300 no 0.000000 2 0.000000 0.000000 1.000000 40.000000 trnI-GAU_part2 tRNA trnI-GAU trnI-GAU 136487 136521 -1 35 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 trnI-GAU_part1 tRNA trnI-GAU trnI-GAU 137475 137516 -1 42 IRa 0.002052 1 0 300 224 no 0.000000 2 0.000000 0.002052 1.000000 37.600000 IGS_144 igs trnI-GAU|rrn16 trnI-GAU-rrn16 137517 137810 0 294 IRa 0.005108 17 0 300 300 no 0.022388 11 0.272727 0.005108 1.000000 43.700000 rrn16 rRNA rrn16 rrn16 137811 139301 -1 1491 IRa 0.000000 0 0 69 300 no 0.000000 1 0.000000 0.000000 1.000000 30.200000 IGS_145 igs rrn16|trnV-GAC rrn16-trnV-GAC 139302 139534 0 233 IRa 0.002356 11 0 300 300 no 0.037313 13 0.384615 0.002356 1.000000 41.400000 trnV-GAC tRNA trnV-GAC trnV-GAC 139535 139606 -1 72 IRa 0.000000 0 0 300 254 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_146 igs trnV-GAC|ycf15 trnV-GAC-ycf15 139607 140209 0 603 IRa 0.003049 23 35 300 121 no 0.097015 25 0.520000 0.003052 1.000000 48.300000 ycf15 gene ycf15 ycf15 140210 140401 1 192 IRa 0.001954 4 0 205 300 no 0.007463 5 0.200000 0.001954 1.000000 37.400000 IGS_147 igs ycf15|rps12 ycf15-rps12 140402 141415 0 1014 IRa 0.001458 37 65 70 300 no 0.156716 39 0.538462 0.001457 0.999014 44.600000 rps12_part2 gene rps12 rps12 141416 142219 1 804 IRa 0.000664 29 10 300 300 no 0.067164 15 0.600000 0.000664 1.000000 47.600000 IGS_148 igs rps12|rps7 rps12-rps7 142220 142272 0 53 IRa 0.003204 2 0 300 300 no 0.007463 4 0.250000 0.003204 1.000000 40.000000 rps7 gene rps7 rps7 142273 142740 1 468 IRa 0.000375 5 0 300 300 no 0.014925 5 0.400000 0.000375 1.000000 39.000000 IGS_149 igs rps7|ndhB rps7-ndhB 142741 143070 0 330 IRa 0.000535 7 0 300 300 no 0.037313 8 0.625000 0.000535 1.000000 38.000000 ndhB gene ndhB ndhB 143071 145285 1 2215 IRa 0.001137 41 0 300 300 no 0.111940 34 0.441176 0.001137 1.000000 43.400000 IGS_150 igs ndhB|trnL-CAA ndhB-trnL-CAA 145286 145871 0 586 IRa 0.001169 18 6 300 132 no 0.089552 20 0.600000 0.001169 1.000000 41.900000 trnL-CAA tRNA trnL-CAA trnL-CAA 145872 145952 1 81 IRa 0.000000 0 0 300 51 no 0.000000 1 0.000000 0.000000 1.000000 22.600000 IGS_151 igs trnL-CAA|ycf2 trnL-CAA-ycf2 145953 146515 0 563 IRa 0.004466 20 18 300 300 no 0.074627 21 0.476190 0.004470 1.000000 51.100000 ycf2 gene ycf2 ycf2 146516 153358 -1 6843 IRa 0.001692 177 42 300 300 no 0.380597 80 0.637500 0.001692 1.000000 45.600000 IGS_152 igs ycf2|trnI-CAU ycf2-trnI-CAU 153359 153446 0 88 IRa 0.001149 2 0 300 300 no 0.007463 3 0.333333 0.001149 1.000000 37.200000 trnI-CAU tRNA trnI-CAU trnI-CAU 153447 153520 1 74 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 0.000000 1.000000 33.800000 IGS_153 igs trnI-CAU|rpl23 trnI-CAU-rpl23 153521 153685 0 165 IRa 0.000180 1 0 300 300 no 0.000000 2 0.000000 0.000180 1.000000 34.600000 rpl23 gene rpl23 rpl23 153686 153967 1 282 IRa 0.000359 2 0 300 300 no 0.007463 3 0.333333 0.000359 1.000000 34.900000 IGS_154 igs rpl23|rpl2 rpl23-rpl2 153968 153985 0 18 IRa 0.000000 0 0 300 300 no 0.000000 1 0.000000 NA 1.000000 33.800000 rpl2 gene rpl2 rpl2 153986 155474 1 1489 IRa 0.000548 31 511 300 11 no 0.141791 30 0.633333 0.000548 1.000000 37.500000 IGS_155 igs rpl2|trnH-GUG rpl2-trnH-GUG 155475 11 0 85 IRa 0.027457 21 85 300 80 no 0.261194 53 0.660377 0.024563 1.000000 59.100000