primer_id label_name rank fwd_seq rev_seq fwd_len rev_len fwd_gc rev_gc fwd_tm rev_tm fwd_self_any_th rev_self_any_th primer3_penalty target_start target_end amplicon_size cross_species_success_rate primer_score trnK-UUU-rps16_p1 trnK-UUU-rps16 1 AGTCGCACTTAAAAGCCGAG AAGGCGGGTGTTTTTATGGA 20 20 50.0 45.0 58.6 57.7 6.4 0.0 0.866610 4429 5605 1285-1488 1.000000 85.0 trnK-UUU-rps16_p2 trnK-UUU-rps16 2 AGTCGCACTTAAAAGCCGAG AGGCGGGTGTTTTTATGGAA 20 20 50.0 45.0 58.6 57.7 6.4 0.0 0.866610 4429 5605 1284-1487 1.000000 85.0 trnK-UUU-rps16_p3 trnK-UUU-rps16 3 GAGTCGCACTTAAAAGCCGA AAGGCGGGTGTTTTTATGGA 20 20 50.0 45.0 58.6 57.7 3.0 0.0 0.870661 4429 5605 1286-1489 1.000000 85.0 trnK-UUU-rps16_p4 trnK-UUU-rps16 4 GAGTCGCACTTAAAAGCCGA AGGCGGGTGTTTTTATGGAA 20 20 50.0 45.0 58.6 57.7 3.0 0.0 0.870661 4429 5605 1285-1488 1.000000 85.0 trnK-UUU-rps16_p5 trnK-UUU-rps16 5 AGTCGCACTTAAAAGCCGAG GGCGGGTGTTTTTATGGAAC 20 20 50.0 50.0 58.6 57.6 6.4 0.0 0.927864 4429 5605 1283-1486 1.000000 84.6 psbI-trnS-GCU_p1 psbI-trnS-GCU 1 CCTATCTAACGATCCAGGACG TGGACTAAAGCGTCGGATTG 21 20 52.4 50.0 57.2 58.0 9.2 0.0 1.838128 8764 9202 495-566 1.000000 74.6 psbI-trnS-GCU_p2 psbI-trnS-GCU 2 CCTATCTAACGATCCAGGACG GTGGACTAAAGCGTCGGATT 21 20 52.4 50.0 57.2 58.0 9.2 0.0 1.839516 8764 9202 496-567 1.000000 74.6 psbI-trnS-GCU_p3 psbI-trnS-GCU 3 CCTATCTAACGATCCAGGACG AAGGGCCCTTTTCAATTGGT 21 20 52.4 45.0 57.2 57.9 9.2 32.5 1.950414 8764 9202 540-611 1.000000 73.3 psbI-trnS-GCU_p4 psbI-trnS-GCU 4 CCTATCTAACGATCCAGGACG AGGGCCCTTTTCAATTGGTT 21 20 52.4 45.0 57.2 57.9 9.2 22.3 1.950414 8764 9202 539-610 1.000000 73.3 psbI-trnS-GCU_p5 psbI-trnS-GCU 5 CCTATCTAACGATCCAGGACG TTTTTCGTACCGAGGGTTCG 21 20 52.4 50.0 57.2 58.2 9.2 7.4 2.051501 8764 9202 458-529 1.000000 73.3 trnS-GCU-trnG-UCC_p1 trnS-GCU-trnG-UCC 1 CAATCCGACGCTTTAGTCCA TGAATCAAACGAGGGATCCC 20 20 50.0 50.0 58.0 57.3 0.0 24.6 0.714678 9291 10367 1090-1189 1.000000 82.8 trnS-GCU-trnG-UCC_p2 trnS-GCU-trnG-UCC 2 AATCCGACGCTTTAGTCCAC TGAATCAAACGAGGGATCCC 20 20 50.0 50.0 58.0 57.3 0.0 24.6 0.716066 9291 10367 1089-1188 1.000000 82.8 trnS-GCU-trnG-UCC_p3 trnS-GCU-trnG-UCC 3 ACGGAAAGAGAGGGATTCGA TGAATCAAACGAGGGATCCC 20 20 50.0 50.0 58.2 57.3 0.0 24.6 0.861444 9291 10367 1144-1243 1.000000 81.4 trnS-GCU-trnG-UCC_p4 trnS-GCU-trnG-UCC 4 CAATCCGACGCTTTAGTCCA GGATCCATAGAACGAATCGCA 20 21 50.0 47.6 58.0 58.0 0.0 7.0 1.031212 9291 10367 1058-1157 1.000000 80.4 trnS-GCU-trnG-UCC_p5 trnS-GCU-trnG-UCC 5 AATCCGACGCTTTAGTCCAC GGATCCATAGAACGAATCGCA 20 21 50.0 47.6 58.0 58.0 0.0 7.0 1.032600 9291 10367 1057-1156 1.000000 80.4 trnR-UCU-atpA_p1 trnR-UCU-atpA 1 GGTTCAAATCCTATTGGACGC CATTCACTCGGGAAGCAGAA 21 20 47.6 50.0 57.3 57.9 0.0 0.0 1.791932 11560 12061 556-662 1.000000 73.9 trnR-UCU-atpA_p2 trnR-UCU-atpA 2 GGTTCAAATCCTATTGGACGC AAGACATTCACTCGGGAAGC 21 20 47.6 50.0 57.3 57.9 0.0 0.0 1.793395 11560 12061 560-666 1.000000 73.8 trnR-UCU-atpA_p3 trnR-UCU-atpA 3 GGTTCAAATCCTATTGGACGC GGAAGCAGAAGCCCTTTTGA 21 20 47.6 50.0 57.3 58.4 0.0 3.1 2.071968 11560 12061 546-652 1.000000 71.7 trnR-UCU-atpA_p4 trnR-UCU-atpA 4 GGTTCAAATCCTATTGGACGC ATTCACTCGGGAAGCAGAAG 21 20 47.6 50.0 57.3 57.6 0.0 0.0 2.086062 11560 12061 555-661 1.000000 71.5 trnR-UCU-atpA_p5 trnR-UCU-atpA 5 TGGATAGGACAGAGGTCTTCT CATTCACTCGGGAAGCAGAA 21 20 47.6 50.0 56.9 57.9 0.0 0.0 2.150746 11560 12061 591-697 1.000000 70.8 psbZ-trnG-GCC_p1 psbZ-trnG-GCC 1 CTTCTCCTGATGGTTGGTCG GCGTCTTCTCTTTGGCAAAG 20 20 55.0 50.0 58.0 57.7 0.0 29.6 0.338107 40859 41571 789-868 1.000000 85.0 psbZ-trnG-GCC_p2 psbZ-trnG-GCC 2 CTTCTCCTGATGGTTGGTCG ATACATAAATAGGGGGCGCG 20 20 55.0 50.0 58.0 57.6 0.0 0.0 0.412325 40859 41571 833-912 1.000000 84.2 psbZ-trnG-GCC_p3 psbZ-trnG-GCC 3 TTGCTTCTCCTGATGGTTGG GCGTCTTCTCTTTGGCAAAG 20 20 50.0 50.0 57.8 57.7 0.0 29.6 0.527394 40859 41571 792-871 1.000000 83.5 psbZ-trnG-GCC_p4 psbZ-trnG-GCC 4 TCCTGATGGTTGGTCGAGTA GCGTCTTCTCTTTGGCAAAG 20 20 50.0 50.0 57.8 57.7 0.0 29.6 0.547753 40859 41571 785-864 1.000000 83.3 psbZ-trnG-GCC_p5 psbZ-trnG-GCC 5 GCTTCTCCTGATGGTTGGTC GCGTCTTCTCTTTGGCAAAG 20 20 55.0 50.0 58.3 57.7 0.0 29.6 0.578376 40859 41571 790-869 1.000000 83.1 trnT-UGU-trnL-UAA_p1 trnT-UGU-trnL-UAA 1 GGAATCGAACCGATGACCAT ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 57.8 58.0 15.5 0.0 0.245117 51416 52905 1348-1572 1.000000 86.2 trnT-UGU-trnL-UAA_p2 trnT-UGU-trnL-UAA 2 GGAATCGAACCGATGACCAT TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 57.8 58.1 15.5 0.0 0.309926 51416 52905 1356-1580 1.000000 85.7 trnT-UGU-trnL-UAA_p3 trnT-UGU-trnL-UAA 3 AAATGCGACGCTCTAACCTC ACCAATTTCGCCATATCCCC 20 20 50.0 50.0 58.4 58.0 22.1 0.0 0.363047 51416 52905 1320-1544 1.000000 85.4 trnT-UGU-trnL-UAA_p4 trnT-UGU-trnL-UAA 4 AAATGCGACGCTCTAACCTC TAGCGTCTACCAATTTCGCC 20 20 50.0 50.0 58.4 58.1 22.1 0.0 0.427856 51416 52905 1328-1552 1.000000 84.8 trnT-UGU-trnL-UAA_p5 trnT-UGU-trnL-UAA 5 GGAATCGAACCGATGACCAT AGTCCGTAGCGTCTACCAAT 20 20 50.0 50.0 57.8 58.2 15.5 10.2 0.480302 51416 52905 1362-1586 1.000000 84.3 ndhC-trnV-UAC_p1 ndhC-trnV-UAC 1 TGGCCCTTTATTAATCGGGG AAAAGATGCACGTTGGGTCT 20 20 50.0 45.0 57.3 58.0 15.4 0.0 0.686887 56519 57572 1131-1272 1.000000 82.3 ndhC-trnV-UAC_p2 ndhC-trnV-UAC 2 TGGCCCTTTATTAATCGGGG AGAAGGTCTACGGTTCGAGT 20 20 50.0 50.0 57.3 57.8 15.4 0.0 0.865427 56519 57572 1060-1201 1.000000 81.1 ndhC-trnV-UAC_p3 ndhC-trnV-UAC 3 TGGCCCTTTATTAATCGGGG GATGCACGTTGGGTCTGTAA 20 20 50.0 50.0 57.3 58.2 15.4 0.0 0.864810 56519 57572 1127-1268 1.000000 80.9 ndhC-trnV-UAC_p4 ndhC-trnV-UAC 4 TGGCCCTTTATTAATCGGGG ATGCACGTTGGGTCTGTAAA 20 20 50.0 45.0 57.3 57.7 15.4 0.0 0.932149 56519 57572 1126-1267 1.000000 80.4 ndhC-trnV-UAC_p5 ndhC-trnV-UAC 5 TGGCCCTTTATTAATCGGGG ACGTTGGGTCTGTAAAGCAA 20 20 50.0 45.0 57.3 57.7 15.4 0.0 1.003460 56519 57572 1122-1263 1.000000 79.8 accD_p1 accD 1 TCCTTTCGTTTCGTGTTGGA CCATTGCAATTGCCGGAAAT 20 20 45.0 45.0 57.7 58.0 0.0 26.9 0.339726 63921 65501 2743-2828 0.666667 72.9 accD_p2 accD 2 TCCTTTCGTTTCGTGTTGGA AAGAAGCCATTGCAATTGCC 20 20 45.0 45.0 57.7 57.9 0.0 26.8 0.416260 63921 65501 2749-2834 0.666667 72.3 accD_p3 accD 3 TGACACAACAGGGGGTAAAC CCATTGCAATTGCCGGAAAT 20 20 50.0 45.0 57.6 58.0 0.0 26.9 0.378709 63921 65501 2599-2599 0.333333 50.3 accD_p4 accD 4 TGACACAACAGGGGGTAAAC AAGAAGCCATTGCAATTGCC 20 20 50.0 45.0 57.6 57.9 0.0 26.8 0.455243 63921 65501 2605-2605 0.333333 49.7 accD_p5 accD 5 AATTTGACACAACAGGGGGT CCATTGCAATTGCCGGAAAT 20 20 45.0 45.0 57.5 58.0 0.0 26.9 0.497060 63921 65501 2603-2603 0.333333 49.4 accD-psaI_p1 accD-psaI 1 GTATGTGCTTCTGGAGGAGC CCATTGCAATTGCCGGAAAT 20 20 55.0 45.0 58.1 58.0 0.0 26.9 0.080258 65502 66076 1034-1053 1.000000 88.9 accD-psaI_p2 accD-psaI 2 GTATGTGCTTCTGGAGGAGC TTGTTTTTCGAGACCCCGTT 20 20 55.0 45.0 58.1 58.0 0.0 0.0 0.094506 65502 66076 1328-1336 1.000000 87.9 accD-psaI_p3 accD-psaI 3 GTATGTGCTTCTGGAGGAGC ATACGTTCTGATCGCCAACC 20 20 55.0 50.0 58.1 58.1 0.0 8.0 0.117323 65502 66076 1293-1301 1.000000 87.8 accD-psaI_p4 accD-psaI 4 GTATGTGCTTCTGGAGGAGC GGATAATGGCCCAGCAGAAA 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.125033 65502 66076 1352-1360 1.000000 87.5 accD-psaI_p5 accD-psaI 5 GTATGTGCTTCTGGAGGAGC AAAGGATAATGGCCCAGCAG 20 20 55.0 50.0 58.1 57.9 0.0 0.0 0.130942 65502 66076 1355-1363 1.000000 87.5 rpl33-rps18_p1 rpl33-rps18 1 TCTGTCCCTGTTGTTGCAAA TCAATTCGATCCCCCGATTG 20 20 45.0 50.0 57.9 57.7 0.0 0.0 0.390844 75035 75279 381-476 1.000000 84.3 rpl33-rps18_p2 rpl33-rps18 2 TTCTGTCCCTGTTGTTGCAA TCAATTCGATCCCCCGATTG 20 20 45.0 50.0 57.9 57.7 0.0 0.0 0.390844 75035 75279 382-477 1.000000 84.3 rpl33-rps18_p3 rpl33-rps18 3 ATTCTGTCCCTGTTGTTGCA TCAATTCGATCCCCCGATTG 20 20 45.0 50.0 57.6 57.7 0.0 0.0 0.617852 75035 75279 383-478 1.000000 82.5 rpl33-rps18_p4 rpl33-rps18 4 TCTGTCCCTGTTGTTGCAAA GGGCAAACGTCTACGAAAAG 20 20 45.0 50.0 57.9 57.4 0.0 9.9 0.725636 75035 75279 355-450 1.000000 82.1 rpl33-rps18_p5 rpl33-rps18 5 TTCTGTCCCTGTTGTTGCAA GGGCAAACGTCTACGAAAAG 20 20 45.0 50.0 57.9 57.4 0.0 9.9 0.725636 75035 75279 356-451 1.000000 82.1 clpP_p1 clpP 1 CTAGTACATGTTCCTCGGCG TGGACAGAAAGTAAACGGCC 20 20 55.0 50.0 57.9 58.1 2.3 0.0 0.234230 77225 79431 2748-2990 0.666667 76.7 clpP_p2 clpP 2 CTAGTACATGTTCCTCGGCG AAACGGCCGGGATCATTTAA 20 20 55.0 45.0 57.9 57.9 2.3 31.8 0.252892 77225 79431 2736-2978 0.666667 76.6 clpP_p3 clpP 3 AGTCGCACATACACCCTAGT AAACGGCCGGGATCATTTAA 20 20 50.0 45.0 58.2 57.9 0.0 31.8 0.283124 77225 79431 2751-2993 0.666667 76.3 clpP_p4 clpP 4 TGACATTTCGGATTGGCTGT TGGACAGAAAGTAAACGGCC 20 20 45.0 50.0 57.8 58.1 0.0 0.0 0.311940 77225 79431 2696-2938 0.666667 76.2 clpP_p5 clpP 5 CTAGTACATGTTCCTCGGCG ACCAAGGCAAACCCATGAAA 20 20 55.0 45.0 57.9 58.2 2.3 0.0 0.321183 77225 79431 2696-2938 0.666667 76.1 clpP-psbB_p1 clpP-psbB 1 TCGAATCCAAATCGCGATGT ATACTCCAACCACCCCATGA 20 20 45.0 50.0 58.1 58.0 24.5 0.0 0.085602 79432 79939 1164-1412 1.000000 89.6 clpP-psbB_p2 clpP-psbB 2 TCGAATCCAAATCGCGATGT TGATACTCCAACCACCCCAT 20 20 45.0 50.0 58.1 58.0 24.5 0.0 0.085602 79432 79939 1166-1414 1.000000 89.6 clpP-psbB_p3 clpP-psbB 3 TCGAATCCAAATCGCGATGT ACCAAAACAAGCTACCCCTG 20 20 45.0 50.0 58.1 58.0 24.5 0.0 0.070035 79432 79939 1381-1629 1.000000 88.9 clpP-psbB_p4 clpP-psbB 4 TCGAATCCAAATCGCGATGT ACACCCATATTCCAGGACCA 20 20 45.0 50.0 58.1 58.0 24.5 0.0 0.085602 79432 79939 1430-1678 1.000000 88.7 clpP-psbB_p5 clpP-psbB 5 TCGAATCCAAATCGCGATGT ATCAAAACCTTCCACACCCC 20 20 45.0 50.0 58.1 58.0 24.5 0.0 0.075093 79432 79939 1498-1746 1.000000 88.6 rps3-rps19_p1 rps3-rps19 1 TACCAAGTCTGAAACCGAGC TGATAAAAGATCTCGTCGTT 20 20 50.0 35.0 57.5 52.1 0.0 0.0 6.347507 91333 92062 565-792 1.000000 49.6 rps3-rps19_p2 rps3-rps19 2 GTCTGAAACCGAGCGGATTT TGATAAAAGATCTCGTCGTT 20 20 50.0 35.0 58.6 52.1 16.8 0.0 6.457219 91333 92062 559-786 1.000000 49.6 rps3-rps19_p3 rps3-rps19 3 TACCAAGTCTGAAACCGAGC AATGATAAAAGATCTCGTCGT 20 21 50.0 33.3 57.5 52.8 0.0 0.0 6.632944 91333 92062 567-794 1.000000 49.6 rps3-rps19_p4 rps3-rps19 4 TACCAAGTCTGAAACCGAGC ATGATAAAAGATCTCGTCGTT 20 21 50.0 33.3 57.5 52.8 0.0 0.0 6.632944 91333 92062 566-793 1.000000 49.6 rps3-rps19_p5 rps3-rps19 5 GTCTGAAACCGAGCGGATTT ATGATAAAAGATCTCGTCGTT 20 21 50.0 33.3 58.6 52.8 16.8 0.0 6.742655 91333 92062 560-787 1.000000 49.6 trnI-CAU-ycf2_p1 trnI-CAU-ycf2 1 GTTGGGCGCTTTAACCATTC CCAGCGACGGTTTCATTAGA 20 20 50.0 50.0 58.0 58.0 7.6 0.0 0.013783 94425 94512 719-731 1.000000 83.4 trnI-CAU-ycf2_p2 trnI-CAU-ycf2 2 GTTGGGCGCTTTAACCATTC TCCAGCGACGGTTTCATTAG 20 20 50.0 50.0 58.0 58.0 7.6 0.0 0.013783 94425 94512 720-732 1.000000 83.4 trnI-CAU-ycf2_p3 trnI-CAU-ycf2 3 CACTTGACTGTCTACGGCTC CCAGCGACGGTTTCATTAGA 20 20 55.0 50.0 58.0 58.0 9.5 0.0 0.020610 94425 94512 1293-1573 1.000000 83.2 trnI-CAU-ycf2_p4 trnI-CAU-ycf2 4 CACTTGACTGTCTACGGCTC TCCAGCGACGGTTTCATTAG 20 20 55.0 50.0 58.0 58.0 9.5 0.0 0.020610 94425 94512 1294-1574 1.000000 83.2 trnI-CAU-ycf2_p5 trnI-CAU-ycf2 5 CCACAACGATGCTGTCCATA CCAGCGACGGTTTCATTAGA 20 20 50.0 50.0 58.0 58.0 0.0 0.0 0.027347 94425 94512 1340-1620 1.000000 83.0 ndhF-rpl32_p1 ndhF-rpl32 1 GGGGAATTGGGCAGACTTAG AGCGTGTCTACCGATTTCAC 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.066423 133894 134858 2184-2327 1.000000 87.0 ndhF-rpl32_p2 ndhF-rpl32 2 GGGGAATTGGGCAGACTTAG CAGCGTGTCTACCGATTTCA 20 20 55.0 50.0 57.9 58.0 0.0 0.0 0.067794 133894 134858 2185-2328 1.000000 87.0 ndhF-rpl32_p3 ndhF-rpl32 3 AAATAACAGGAAGGCGCACA AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 58.1 58.0 10.8 0.0 0.103543 133894 134858 2151-2294 1.000000 86.7 ndhF-rpl32_p4 ndhF-rpl32 4 AATAACAGGAAGGCGCACAA AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 58.1 58.0 10.8 0.0 0.103543 133894 134858 2150-2293 1.000000 86.7 ndhF-rpl32_p5 ndhF-rpl32 5 ATAACAGGAAGGCGCACAAA AGCGTGTCTACCGATTTCAC 20 20 45.0 50.0 58.1 58.0 10.8 0.0 0.103543 133894 134858 2149-2292 1.000000 86.7 rpl23_p1 rpl23 1 GAATGGTTAAAGCGCCCAAC CACTTGACTGTCTACGGCTC 20 20 50.0 55.0 58.0 58.0 2.3 9.5 0.025228 174169 174468 588-588 0.333333 53.1 rpl23_p2 rpl23 2 GAATGGTTAAAGCGCCCAAC CCACAACGATGCTGTCCATA 20 20 50.0 50.0 58.0 58.0 2.3 0.0 0.031965 174169 174468 635-635 0.333333 53.1 rpl23_p3 rpl23 3 GAATGGTTAAAGCGCCCAAC TCTGTCGGTGCTTGAAACAA 20 20 50.0 45.0 58.0 58.0 2.3 0.0 0.040459 174169 174468 1143-1143 0.333333 53.0 rpl23_p4 rpl23 4 GAATGGTTAAAGCGCCCAAC TTCTGTCGGTGCTTGAAACA 20 20 50.0 45.0 58.0 58.0 2.3 0.0 0.040459 174169 174468 1144-1144 0.333333 53.0 rpl23_p5 rpl23 5 GTTGAACCCTGTGAATTGCG CACTTGACTGTCTACGGCTC 20 20 50.0 55.0 57.9 58.0 0.0 9.5 0.066505 174169 174468 897-897 0.333333 52.8